RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 IFT46Q9NQC8 304 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 DIABLOQ9NR28 239 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 TXNL4BQ9NX01 149 aaKnown RBP5.83□□□□□ -1.48
VPS50-203ENST00000436177 RAB26Q9ULW5 256 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 SELENOKQ9Y6D0 94 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 STARD9Q9P2P6 4700 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 IGLV11-55A0A075B6I3 123 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 A0A0A6YYH2 397 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 IGHV3-35A0A0C4DH35 117 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 LOC100506127A0A0U1RQW1 187 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 NUPR2A6NF83 97 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 MFSD2BA6NFX1 497 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 OR4C46A6NHA9 309 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 A6NJ64 397 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 SSX5O60225 188 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 SNAPC5O75971 98 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 FCER2P06734 321 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 CTRB1P17538 263 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 S100GP29377 79 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 CBX5P45973 191 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 TAS2R31P59538 309 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 OR2B8PP59922 312 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 TM4SF20Q53R12 229 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 IDNKQ5T6J7 187 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 UBE2UQ5VVX9 321 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 CTRB2Q6GPI1 263 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 LAMTOR1Q6IAA8 161 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 HSD17B13Q7Z5P4 300 aaPredicted RBP5.82□□□□□ -1.48
VPS50-203ENST00000436177 NR2C2APQ86WQ0 139 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 TMEM217Q8N7C4 229 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 FANCD2OSQ96PS1 177 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 GPHA2Q96T91 129 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 SPAG8Q99932 426 aaPredicted RBP5.82□□□□□ -1.48
VPS50-203ENST00000436177 C20orf24Q9BUV8 137 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 DAZ1Q9NQZ3 744 aaKnown RBP5.82□□□□□ -1.48
VPS50-203ENST00000436177 CCL28Q9NRJ3 127 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 TMEM140Q9NV12 185 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 COMMD9Q9P000 198 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 MRPL27Q9P0M9 148 aaKnown RBP5.82□□□□□ -1.48
VPS50-203ENST00000436177 MLXQ9UH92 298 aa5.82□□□□□ -1.48
VPS50-203ENST00000436177 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
VPS50-203ENST00000436177 IGLC7A0M8Q6 106 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 TGOLN2O43493 480 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 HPRT1P00492 218 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 IGLV2-14P01704 120 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 TRAPPC2P0DI81 140 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 TRAPPC2BP0DI82 140 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 OR13C7P0DN81 318 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 RPA2P15927 270 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 EDN2P20800 178 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 PTBP1P26599 531 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS50-203ENST00000436177 SDC2P34741 201 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 ELLP55199 621 aaPredicted RBP5.81□□□□□ -1.48
VPS50-203ENST00000436177 UNQ9165/PRO28630Q6UXU0 137 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 HOGA1Q86XE5 327 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 CMTM1Q8IZ96 169 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 OR2C3Q8N628 320 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 GVQW1Q8N7I0 195 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 STPG3Q8N7X2 389 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 GDPD1Q8N9F7 314 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 UBAC2Q8NBM4 344 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 OR1L8Q8NGR8 309 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 ZNF502Q8TBZ5 544 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 VN1R17PQ8TDU5 208 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 PLEKHA2Q9HB19 425 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 EHFQ9NZC4 300 aa5.81□□□□□ -1.48
VPS50-203ENST00000436177 KLK5Q9Y337 293 aaPredicted RBP5.81□□□□□ -1.48
VPS50-203ENST00000436177 A0A1B0GW64 132 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 OR2T8A6NH00 312 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 MARCH11A6NNE9 402 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 E7EUB6 86 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 UPK2O00526 184 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 UBE2CO00762 179 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 SPRY2O43597 315 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 S1PR2O95136 353 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 LY6G6CO95867 125 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 RLN1P04808 185 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 FGF2P09038 288 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 BMI1P35226 326 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 TAS2R46P59540 309 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 EIF4EBP1Q13541 118 aaPredicted RBP5.8□□□□□ -1.48
VPS50-203ENST00000436177 DEFB135Q30KP9 77 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 Q56UQ5 140 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 SLC25A24Q6NUK1 477 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 SPSB3Q6PJ21 355 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 ZNF773Q6PK81 442 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 SPARTQ8N0X7 666 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 OR5AP2Q8NGF4 316 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 OR5H2Q8NGV7 314 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 TMEM190Q8WZ59 177 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 LSM10Q969L4 123 aaKnown RBP5.8□□□□□ -1.48
VPS50-203ENST00000436177 BSCL2Q96G97 398 aaPredicted RBP5.8□□□□□ -1.48
VPS50-203ENST00000436177 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 C5orf66Q9H5L9 145 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 AUNIPQ9H7T9 357 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 C21orf62Q9NYP8 219 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 TP53TG1Q9Y2A0 90 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 DMRT1Q9Y5R6 373 aa5.8□□□□□ -1.48
VPS50-203ENST00000436177 TRAV3A0A0B4J244 114 aa5.79□□□□□ -1.48
VPS50-203ENST00000436177 KIR2DL5BA0A0G2JN68 375 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms