RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
CDC42-IT1-201ENST00000431803 SRSF8Q9BRL6 282 aaKnown RBP7.06□□□□□ -1.28
CDC42-IT1-201ENST00000431803 Q9H521 79 aa7.06□□□□□ -1.28
CDC42-IT1-201ENST00000431803 SRD5A3Q9H8P0 318 aa7.06□□□□□ -1.28
CDC42-IT1-201ENST00000431803 MLXQ9UH92 298 aa7.06□□□□□ -1.28
CDC42-IT1-201ENST00000431803 S4R3C0 116 aa7.06□□□□□ -1.28
CDC42-IT1-201ENST00000431803 TRBV7-1A0A0A6YYK4 115 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 TRAV3A0A0B4J244 114 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 LOC100506127A0A0U1RQW1 187 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 HPRT1P00492 218 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 CLEC3BP05452 202 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 DEFA4P12838 97 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 NQO2P16083 231 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 CBX5P45973 191 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 CATR1Q13166 79 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 FAM106AQ4KMX7 169 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ZNF57Q68EA5 555 aaPredicted RBP7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 UNQ9165/PRO28630Q6UXU0 137 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ZNF818PQ6ZRF7 136 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 OR5AP2Q8NGF4 316 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ZNF502Q8TBZ5 544 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 CD300LFQ8TDQ1 290 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 GIMAP1Q8WWP7 306 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 CXorf58Q96LI9 332 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 SLC5A7Q9GZV3 580 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 PLEKHA2Q9HB19 425 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 HRASLSQ9HDD0 168 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 DIABLOQ9NR28 239 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ANAPC10Q9UM13 185 aa7.05□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ZNF320A2RRD8 509 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 UPK2O00526 184 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 XRCC3O43542 346 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 S1PR2O95136 353 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 FCER2P06734 321 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 C8orf88P0DMB2 117 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 GNRHRP30968 328 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 FXYD4P59646 89 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 SLC16A13Q7RTY0 426 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 TMEM17Q86X19 198 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 UXS1Q8NBZ7 420 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 OR51H1Q8NH63 302 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 IL17DQ8TAD2 202 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 MARC2Q969Z3 335 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 QTRT1Q9BXR0 403 aaKnown RBP7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 COMMD5Q9GZQ3 224 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 TMEM140Q9NV12 185 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 COMMD9Q9P000 198 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 SELENOKQ9Y6D0 94 aa7.04□□□□□ -1.28
CDC42-IT1-201ENST00000431803 MEIS3P1A6NDR6 274 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 MARCH11A6NNE9 402 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ATF4P18848 351 aaPredicted RBP7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 PTBP1P26599 531 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 GPR183P32249 361 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ELLP55199 621 aaPredicted RBP7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 WT1-ASQ06250 92 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 NEDD8Q15843 81 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 KCTD21Q4G0X4 260 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 TM4SF20Q53R12 229 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 AADACL3Q5VUY0 350 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 THOC7Q6I9Y2 204 aaKnown RBP7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 DHRS11Q6UWP2 260 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 BTNL8Q6UX41 500 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 CADM3Q8N126 398 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 GDPD1Q8N9F7 314 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 OR10W1Q8NGF6 305 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 OR52B4Q8NGK2 314 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 VN1R17PQ8TDU5 208 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 BORCS5Q969J3 196 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 MOB3AQ96BX8 217 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 ZNF436Q9C0F3 470 aaPredicted RBP7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 THYN1Q9P016 225 aa7.03□□□□□ -1.28
CDC42-IT1-201ENST00000431803 TRAV25A0A0B4J276 109 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 TGOLN2O43493 480 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 SCAF4O95104 1147 aaKnown RBP7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 RLN1P04808 185 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 SERPINE2P07093 398 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 NAT1P18440 290 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 TGFBR1P36897 503 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 RFX2P48378 723 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 HERV-K104P61576 105 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 ANKRD55Q3KP44 614 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 UBE2NLQ5JXB2 153 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 PLET1Q6UQ28 207 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 HSD17B13Q7Z5P4 300 aaPredicted RBP7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 CROCCP3Q8IVE0 287 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 DMBX1Q8NFW5 382 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 TMEM190Q8WZ59 177 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 ATP6V0BQ99437 205 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 GGTLC1Q9BX51 225 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 IFT46Q9NQC8 304 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 NDUFA4L2Q9NRX3 87 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 EHFQ9NZC4 300 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 MRPL27Q9P0M9 148 aaKnown RBP7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 UFC1Q9Y3C8 167 aa7.02□□□□□ -1.29
CDC42-IT1-201ENST00000431803 LOC102724200A0A096LPH7 203 aaPredicted RBP7.01□□□□□ -1.29
CDC42-IT1-201ENST00000431803 IGHV3-35A0A0C4DH35 117 aa7.01□□□□□ -1.29
CDC42-IT1-201ENST00000431803 TEX50A0A1B0GTY4 177 aa7.01□□□□□ -1.29
CDC42-IT1-201ENST00000431803 NPIPB6E9PJ23 425 aa7.01□□□□□ -1.29
CDC42-IT1-201ENST00000431803 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
CDC42-IT1-201ENST00000431803 JTBO76095 146 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms