RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PHB2Q99623 299 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 QTRT1Q9BXR0 403 aaKnown RBP11.22□□□□□ -0.61
CSTF3-202ENST00000431742 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 NDUFA4L2Q9NRX3 87 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 ZFP57Q9NU63 452 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 FKBP11Q9NYL4 201 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 SHPKQ9UHJ6 478 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 ZNF257Q9Y2Q1 563 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
CSTF3-202ENST00000431742 TSSC4Q9Y5U2 329 aaPredicted RBP11.22□□□□□ -0.61
CSTF3-202ENST00000431742 TRAV6A0A075B6T7 132 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 PIGBOS1A0A0B4J2F0 54 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 NPIPB5A8MRT5 1133 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 H3BUA1 57 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 HLA-AP01891 365 aaKnown RBP11.21□□□□□ -0.61
CSTF3-202ENST00000431742 AREGP15514 252 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 DEFA1P59665 94 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 DEFA3P59666 94 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.61
CSTF3-202ENST00000431742 LYZL2Q7Z4W2 148 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 LYG2Q86SG7 212 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 DUSP18Q8NEJ0 188 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 OR5T1Q8NG75 326 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 OR4A16Q8NH70 328 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 ENKURQ8TC29 256 aa11.21□□□□□ -0.61
CSTF3-202ENST00000431742 DUS4LO95620 317 aaKnown RBP11.2□□□□□ -0.62
CSTF3-202ENST00000431742 CRYGCP07315 174 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 H2AFB2P0C5Z0 115 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 TRAPPC2P0DI81 140 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 TRAPPC2BP0DI82 140 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 PF4V1P10720 104 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 RAB9AP51151 201 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 KLK9Q2XQG4 91 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 OR10W1Q8NGF6 305 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
CSTF3-202ENST00000431742 CASTOR1Q8WTX7 329 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 GPR146Q96CH1 333 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 SLA2Q9H6Q3 261 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 PALMDQ9NP74 551 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
CSTF3-202ENST00000431742 M0QZ24 198 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 ST8SIA3O43173 380 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 CTRB1P17538 263 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 PSMB6P28072 239 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 CDX1P47902 265 aaPredicted RBP11.19□□□□□ -0.62
CSTF3-202ENST00000431742 HSPE1P61604 102 aaKnown RBP11.19□□□□□ -0.62
CSTF3-202ENST00000431742 PRCDQ00LT1 54 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 WT1-ASQ06250 92 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 C4orf46Q504U0 113 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 KHDC1LQ5JSQ8 128 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 CTRB2Q6GPI1 263 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 TMEM65Q6PI78 240 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 C18orf65Q6ZTR6 163 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 HSD17B13Q7Z5P4 300 aaPredicted RBP11.19□□□□□ -0.62
CSTF3-202ENST00000431742 ZNF491Q8N8L2 437 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 UBE2E2Q96LR5 201 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 COA4Q9NYJ1 87 aa11.19□□□□□ -0.62
CSTF3-202ENST00000431742 TRBV9A0A0B4J1U6 114 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 A0A1W2PRX2 142 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 RBMXL2O75526 392 aaKnown RBP11.18□□□□□ -0.62
CSTF3-202ENST00000431742 TSPAN15O95858 294 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 RAB25P57735 213 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 NSUN5P1Q3KNT7 163 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 PDLIM3Q53GG5 364 aaPredicted RBP11.18□□□□□ -0.62
CSTF3-202ENST00000431742 C19orf35Q6ZS72 473 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 MITD1Q8WV92 249 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 MS4A10Q96PG2 267 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.18□□□□□ -0.62
CSTF3-202ENST00000431742 TMED3Q9Y3Q3 217 aa11.18□□□□□ -0.62
CSTF3-202ENST00000431742 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 TRGV3P03979 118 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 IL5P05113 134 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 REG1AP05451 166 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 SULT1A3P0DMM9 295 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 SULT1A4P0DMN0 295 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 TPPP2P59282 170 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 OR52E5Q8NH55 327 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 COQ8AQ8NI60 647 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 C4orf3Q8WVX3 66 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 FANCD2OSQ96PS1 177 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 SEC22CQ9BRL7 303 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 MARVELD1Q9BSK0 173 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 HINT2Q9BX68 163 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 GNB4Q9HAV0 340 aa11.17□□□□□ -0.62
CSTF3-202ENST00000431742 IGLV11-55A0A075B6I3 123 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 A0A1B0GU03 582 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 PITX3O75364 302 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 PTTG1O95997 202 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 PRH1P02810 166 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 OR13C7P0DN81 318 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 SLC25A6P12236 298 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 SPCS3P61009 180 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 RUNX1Q01196 453 aa11.16□□□□□ -0.62
CSTF3-202ENST00000431742 SMCO1Q147U7 214 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms