RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
HDAC6-207ENST00000430858 THYN1Q9P016 225 aa7.51□□□□□ -1.21
HDAC6-207ENST00000430858 PEMTQ9UBM1 199 aa7.51□□□□□ -1.21
HDAC6-207ENST00000430858 RSL24D1Q9UHA3 163 aaKnown RBP7.51□□□□□ -1.21
HDAC6-207ENST00000430858 LSM4Q9Y4Z0 139 aaKnown RBP7.51□□□□□ -1.21
HDAC6-207ENST00000430858 TEX50A0A1B0GTY4 177 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 CCDC160A6NGH7 325 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 H0Y980 276 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 BMPR1BO00238 502 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 CYB5BO43169 146 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 GSTZ1O43708 216 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-207ENST00000430858 GGCTO75223 188 aaKnown RBP7.5□□□□□ -1.21
HDAC6-207ENST00000430858 NDUFB8O95169 186 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 IGLV1-51P01701 117 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 SERPINE2P07093 398 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 GP9P14770 177 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 SPNP16150 400 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 CD69Q07108 199 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 IL34Q6ZMJ4 242 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 H2BFWTQ7Z2G1 175 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 CCDC71LQ8N9Z2 235 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 MCFD2Q8NI22 146 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 LSM10Q969L4 123 aaKnown RBP7.5□□□□□ -1.21
HDAC6-207ENST00000430858 SEC22AQ96IW7 307 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 NXF2Q9GZY0 626 aaKnown RBP7.5□□□□□ -1.21
HDAC6-207ENST00000430858 NDUFA4L2Q9NRX3 87 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 COPZ2Q9P299 210 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 NSG2Q9Y328 171 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 OR51B2Q9Y5P1 312 aa7.5□□□□□ -1.21
HDAC6-207ENST00000430858 DNAH3Q8TD57 4116 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 TRBV7-1A0A0A6YYK4 115 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 FABP12A6NFH5 140 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 C15orf61A6NNL5 157 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 DISC1C4P0D8 188 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 B3GALNT1O75752 331 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 ATG12O94817 140 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 IGKV1-39P01597 117 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 IGKV1D-39P04432 117 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 CTSDP07339 412 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-207ENST00000430858 AKAIN1P0CW23 69 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 OR13C7P0DN81 318 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 PI3P19957 117 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 TNFSF8P32971 234 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 PPP5CP53041 499 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 WT1-ASQ06250 92 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 CLEC19AQ6UXS0 136 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 GDPD1Q8N9F7 314 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 OR10W1Q8NGF6 305 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 OR1L6Q8NGR2 347 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 OR13C8Q8NGS7 320 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 OR4A16Q8NH70 328 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 MRGPRFQ96AM1 343 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 CCDC140Q96MF4 163 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 TMEM56Q96MV1 263 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 HINT2Q9BX68 163 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 TMEM14BQ9NUH8 114 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 DMRT1Q9Y5R6 373 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 SMAD5-AS1Q9Y6J3 95 aa7.49□□□□□ -1.21
HDAC6-207ENST00000430858 ANKRD20A5PA0PJZ0 165 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 PPP5D1E7EU14 171 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 ZNF701M0R085 212 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-207ENST00000430858 LGALS9O00182 355 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 IGHV3-23P01764 117 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 CSN3P07498 182 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-207ENST00000430858 ARL3P36405 182 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 SURF2Q15527 256 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-207ENST00000430858 FAAP20Q6NZ36 180 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 HAPLN4Q86UW8 402 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 GPHB5Q86YW7 130 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 MARCH1Q8TCQ1 289 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 TP53RKQ96S44 253 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 PRRT1Q99946 306 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 SOSTQ9BQB4 213 aa7.48□□□□□ -1.21
HDAC6-207ENST00000430858 RBM38Q9H0Z9 239 aaKnown RBP7.48□□□□□ -1.21
HDAC6-207ENST00000430858 C14orf166Q9Y224 244 aaKnown RBP7.48□□□□□ -1.21
HDAC6-207ENST00000430858 F11RQ9Y624 299 aaKnown RBP7.48□□□□□ -1.21
HDAC6-207ENST00000430858 MFSD2BA6NFX1 497 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 DBX1A6NMT0 343 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 OR2C1O95371 312 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 CLEC3BP05452 202 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 UCP1P25874 307 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 MECP2P51608 486 aaKnown RBP7.47□□□□□ -1.21
HDAC6-207ENST00000430858 TRIM16LQ309B1 348 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 FAM106AQ4KMX7 169 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 LCN12Q6JVE5 192 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 SLC25A24Q6NUK1 477 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 Q8N402 240 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 OR4C16Q8NGL9 310 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 OR2K2Q8NGT1 345 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 ZNF502Q8TBZ5 544 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 VN1R17PQ8TDU5 208 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 ATP6V0BQ99437 205 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 SLC2A8Q9NY64 477 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 SCP2D1Q9UJQ7 156 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 S4R3C0 116 aa7.47□□□□□ -1.21
HDAC6-207ENST00000430858 IGKV1-5P01602 117 aa7.46□□□□□ -1.22
HDAC6-207ENST00000430858 HLA-AP01891 365 aaKnown RBP7.46□□□□□ -1.22
HDAC6-207ENST00000430858 GPR183P32249 361 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms