RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ACER3Q9NUN7 267 aa1.64□□□□□ -2.15
HMGB1P9-201ENST00000429856 TP73-AS1Q9UF72 201 aa1.64□□□□□ -2.15
HMGB1P9-201ENST00000429856 SSR3Q9UNL2 185 aa1.64□□□□□ -2.15
HMGB1P9-201ENST00000429856 GINS2Q9Y248 185 aa1.64□□□□□ -2.15
HMGB1P9-201ENST00000429856 KLK5Q9Y337 293 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRAPPC1Q9Y5R8 145 aa1.64□□□□□ -2.15
HMGB1P9-201ENST00000429856 ERCC6L2Q5T890 1561 aa1.64□□□□□ -2.15
HMGB1P9-201ENST00000429856 CCDC88AQ3V6T2 1871 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 ABCC12Q96J65 1359 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRAV9-1A0A075B6T8 112 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 A0A087WUU8 490 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRAV4A0A0B4J268 109 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 SPRR5A0A1B0GTR4 108 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 TMEM269A0A1B0GVZ9 245 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 A0A1W2PRE2 83 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 IGSF23A1L1A6 192 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 DPRXA6NFQ7 191 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 H3BQ85 93 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 SLC17A3O00476 420 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 UBE2L6O14933 153 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 PIAS1O75925 651 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 NDUFC2O95298 119 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 SRP19P09132 144 aaKnown RBP1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 TFPTP0C1Z6 253 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 CCL3P10147 92 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 GZMHP20718 246 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 NPPCP23582 126 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 CRABP1P29762 137 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 RAB13P51153 203 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 KLF3P57682 345 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 TPI1P60174 286 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 RPL30P62888 115 aaKnown RBP1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 SURF2Q15527 256 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 LY6EQ16553 131 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 KRTAP25-1Q3LHN0 102 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 TMEM128Q5BJH2 165 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 Q6Q795 121 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 RASL11AQ6T310 242 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 SSX8Q7RTT4 187 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 LYPD6Q86Y78 171 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 ZNF561Q8N587 486 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 APCDD1LQ8NCL9 501 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 ACOT12Q8WYK0 555 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 LYSMD1Q96S90 227 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 UPK3BQ9BT76 320 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 C1orf50Q9BV19 199 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 C20orf27Q9GZN8 174 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 C16orf95Q9H693 158 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 EFCAB1Q9HAE3 211 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 SNX12Q9UMY4 172 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 ZNF443Q9Y2A4 671 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 HSPB11Q9Y547 144 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 DENND4CQ5VZ89 1909 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 YTHDC2Q9H6S0 1430 aaKnown RBP1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 EML6Q6ZMW3 1958 aa1.63□□□□□ -2.15
HMGB1P9-201ENST00000429856 CPDO75976 1380 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 DOCK4Q8N1I0 1966 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 C19orf71A6NCJ1 209 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 CSN2P05814 226 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 SCGB1A1P11684 91 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 SLC25A16P16260 332 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 S100A7P31151 101 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 GABRA2P47869 451 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 PSMD8P48556 350 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 RWDD2BP57060 319 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 BAMBIQ13145 260 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 SMCO1Q147U7 214 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 KRTAP13-2Q52LG2 175 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 DNLZQ5SXM8 178 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 ZNF660Q6AZW8 331 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 HMGN2P46Q86SG4 172 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 LYPD1Q8N2G4 141 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 C3orf22Q8N5N4 141 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 FNDC9Q8TBE3 224 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 C11orf40Q8WZ69 217 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 H1FXQ92522 213 aaKnown RBP1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 TOMM6Q96B49 74 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 DNAJC30Q96LL9 226 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 SERPINI1Q99574 410 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 MGLLQ99685 303 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 AIF1LQ9BQI0 150 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 RSPO3Q9BXY4 272 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 TTTY13Q9BZ97 58 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 C6orf62Q9GZU0 229 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 CHST6Q9GZX3 395 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 FAM107BQ9H098 131 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 LRTM1Q9HBL6 345 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 TVP23BQ9NYZ1 205 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 AMMECR1Q9Y4X0 333 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 R4GN34 69 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 SETD5Q9C0A6 1442 aa1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRPM3Q9HCF6 1732 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P9-201ENST00000429856 ARHGEF10O15013 1369 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 SSH2Q76I76 1423 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRBV19A0A075B6N1 114 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRAV41A0A0B4J266 112 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 TRAV40A0A0B4J280 105 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 A0A1B0GW54 56 aa1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 VPS37CA5D8V6 355 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P9-201ENST00000429856 A8MWP6 167 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms