RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 DMRT1Q9Y5R6 373 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 ICE1Q9Y2F5 2266 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 RGPD3A6NKT7 1758 aaPredicted RBP10.79□□□□□ -0.68
LDB3-205ENST00000429277 TMEM262E9PQX1 116 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 WDR82Q6UXN9 313 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 CARHSP1Q9Y2V2 147 aaKnown RBP10.79□□□□□ -0.68
LDB3-205ENST00000429277 IGLV3-32A0A0A0MS00 114 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 NAT1P18440 290 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 TMEM144Q7Z5S9 345 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 GPHA2Q96T91 129 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 RPP21Q9H633 154 aaKnown RBP10.78□□□□□ -0.68
LDB3-205ENST00000429277 A0A087WWC5 75 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 PSG7Q13046 419 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 OR13A1Q8NGR1 328 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 ASCL2Q99929 193 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 JKAMPQ9P055 326 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
LDB3-205ENST00000429277 PQLC2LA1A4F0 135 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 WDYHV1Q96HA8 205 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 FOXA2Q9Y261 457 aaPredicted RBP10.78□□□□□ -0.68
LDB3-205ENST00000429277 FAM90A9PA6NNJ1 464 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 DUSP14O95147 198 aaKnown RBP10.78□□□□□ -0.68
LDB3-205ENST00000429277 LEMD1Q68G75 181 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 TNFRSF14Q92956 283 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 OTORQ9NRC9 128 aa10.78□□□□□ -0.68
LDB3-205ENST00000429277 IGHV1-2P23083 117 aa10.77□□□□□ -0.68
LDB3-205ENST00000429277 TTC32Q5I0X7 151 aa10.77□□□□□ -0.68
LDB3-205ENST00000429277 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.68
LDB3-205ENST00000429277 OR13C6PQ8NH95 151 aa10.77□□□□□ -0.68
LDB3-205ENST00000429277 DUX3Q96PT4 197 aa10.77□□□□□ -0.68
LDB3-205ENST00000429277 AICDAQ9GZX7 198 aa10.77□□□□□ -0.68
LDB3-205ENST00000429277 ARFGEF1Q9Y6D6 1849 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 DPRXA6NFQ7 191 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 C9JCJ5 164 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 NBR2O15453 112 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 HOXA5P20719 270 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 FAM216BQ8N7L0 139 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 OR11H4Q8NGC9 324 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 PARD6GQ9BYG4 376 aaPredicted RBP10.77□□□□□ -0.69
LDB3-205ENST00000429277 LINC01549A6NIU2 74 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 ZNHIT1O43257 154 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 ZXDCQ2QGD7 858 aaPredicted RBP10.77□□□□□ -0.69
LDB3-205ENST00000429277 ABHD17AQ96GS6 310 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 C7orf69Q9H7B7 122 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 CBLN4Q9NTU7 201 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 TRBV6-7A0A0A0MS04 114 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 H3BTX0 84 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 IGFBP2P18065 325 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 LEPP41159 167 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 BIVMQ86UB2 503 aa10.77□□□□□ -0.69
LDB3-205ENST00000429277 C17orf98A8MV24 154 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 RSPO4Q2I0M5 234 aaPredicted RBP10.76□□□□□ -0.69
LDB3-205ENST00000429277 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 IGFBP3P17936 291 aaPredicted RBP10.76□□□□□ -0.69
LDB3-205ENST00000429277 SCGB3A1Q96QR1 104 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 VCX2Q9H322 139 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 LOC102724200A0A096LPH7 203 aaPredicted RBP10.76□□□□□ -0.69
LDB3-205ENST00000429277 RAMP1O60894 148 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 CELA3AP09093 270 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 GPR183P32249 361 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 FER1L6-AS1Q8NA97 138 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 MRPL20Q9BYC9 149 aaKnown RBP10.76□□□□□ -0.69
LDB3-205ENST00000429277 PRSS22Q9GZN4 317 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 ZNFX1Q9P2E3 1918 aaKnown RBP10.76□□□□□ -0.69
LDB3-205ENST00000429277 C19orf67A6NJJ6 358 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 UPK2O00526 184 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 FAM166AQ6J272 317 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 ATAD5Q96QE3 1844 aa10.76□□□□□ -0.69
LDB3-205ENST00000429277 A0A0G2JK05 382 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 M0R381 172 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 ERVH48-1M5A8F1 160 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 CGAP01215 116 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 RNASE1P07998 156 aaKnown RBP10.75□□□□□ -0.69
LDB3-205ENST00000429277 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 C19orf48Q6RUI8 117 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 C1QL2Q7Z5L3 287 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 CMC4P56277 68 aaPredicted RBP10.75□□□□□ -0.69
LDB3-205ENST00000429277 EFNB1P98172 346 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 CCL1P22362 96 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 LAIR2Q6ISS4 152 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 TMEM160Q9NX00 188 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 A0A1B0GTI1 187 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 DSCR9P59020 149 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 ITLN2Q8WWU7 325 aaPredicted RBP10.75□□□□□ -0.69
LDB3-205ENST00000429277 RBMY1BA6NDE4 496 aaKnown RBP10.75□□□□□ -0.69
LDB3-205ENST00000429277 RBMY1EA6NEQ0 496 aaKnown RBP10.75□□□□□ -0.69
LDB3-205ENST00000429277 RBMY1DP0C7P1 496 aaKnown RBP10.75□□□□□ -0.69
LDB3-205ENST00000429277 RBMY1A1P0DJD3 496 aaKnown RBP10.75□□□□□ -0.69
LDB3-205ENST00000429277 RBMY1CP0DJD4 496 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 NUDT10Q8NFP7 164 aa10.75□□□□□ -0.69
LDB3-205ENST00000429277 DOCK5Q9H7D0 1870 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 IGHV3OR16-10A0A075B7F0 116 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
LDB3-205ENST00000429277 SRP19P09132 144 aaKnown RBP10.74□□□□□ -0.69
LDB3-205ENST00000429277 CBLN1P23435 193 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms