RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FOXB1Q99853 325 aa12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 RALGAPA1Q6GYQ0 2036 aa12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 LY6G6EA0A0G2JKS1 128 aa12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 CDX4O14627 284 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 EDDM3BP56851 147 aa12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 CDCP2Q5VXM1 449 aa12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 TMEM136Q6ZRR5 245 aa12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 U3KQA8 63 aa12.16□□□□□ -0.46
SYNGAP1-203ENST00000428982 GFRA3O60609 400 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 CCL3P10147 92 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 SRD5A2P31213 254 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 YTHDF2Q9Y5A9 579 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 TRAV17A0A0B4J275 112 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 TRBV7-9A0A0J9YWB2 115 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 H3BRM9 83 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 TIMP3P35625 211 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 PLA2G2CQ5R387 149 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 GAPTQ8N292 157 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 CRYBB3P26998 211 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 ATP5G3P48201 142 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 OR10D3Q8NH80 312 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 SPTBN2O15020 2390 aa12.15□□□□□ -0.46
SYNGAP1-203ENST00000428982 IGKV1D-8A0A087WSZ0 117 aa12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 F2RP25116 425 aa12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 KIR3DS1Q14943 382 aa12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 TCF24Q7RTU0 167 aa12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 NFAM1Q8NET5 270 aaPredicted RBP12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 OR5P3Q8WZ94 311 aa12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 DEFB127Q9H1M4 99 aa12.15□□□□□ -0.47
SYNGAP1-203ENST00000428982 CXCL13O43927 109 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 ZNF32P17041 273 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 IGFBP2P18065 325 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 ZNF766Q5HY98 468 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 WIPI1Q5MNZ9 446 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 TIMM23BQ5SRD1 257 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 PPP1R32Q7Z5V6 425 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 ZDHHC23Q8IYP9 409 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 ZNF525Q8N782 197 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 LSM10Q969L4 123 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 ADTRPQ96IZ2 230 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 UFC1Q9Y3C8 167 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 A1L4Q6 167 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 TNFSF11O14788 317 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 LYPD6Q86Y78 171 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 ATG2AQ2TAZ0 1938 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 REG1AP05451 166 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 GCSHP23434 173 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 MFAP2P55001 183 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 TCTAP57738 103 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 IL1F10Q8WWZ1 152 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 IL36GQ9NZH8 169 aa12.14□□□□□ -0.47
SYNGAP1-203ENST00000428982 IGHV3-15A0A0B4J1V0 119 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 MS4A5Q9H3V2 200 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 FAM186AA6NE01 2351 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 IGKV1-9A0A0C4DH69 117 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 ID3Q02535 119 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 CATR1Q13166 79 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 LIN7CQ9NUP9 197 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 UNC80Q8N2C7 3258 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 LIFP15018 202 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 TAS2R45P59539 299 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 FXYD3Q14802 87 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 OCC1Q8TAD7 63 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 TRANK1O15050 2925 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 OR5AL1P0C617 328 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 B4GALT1P15291 398 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 FCER1GP30273 86 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 TNXAQ16473 311 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 RCHY1Q96PM5 261 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 UBTD1Q9HAC8 227 aa12.13□□□□□ -0.47
SYNGAP1-203ENST00000428982 OR11H12B2RN74 326 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 SSTR5P35346 364 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 MEOX1P50221 254 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 OR11H1Q8NG94 326 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 OR11H2Q8NH07 326 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 TMEM45BQ96B21 275 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 MS4A6AQ9H2W1 248 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 SLC7A10Q9NS82 523 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 RTL8BQ17RB0 113 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 C1QL2Q7Z5L3 287 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 LINC00596Q86U02 117 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 STPG3Q8N7X2 389 aa12.12□□□□□ -0.47
SYNGAP1-203ENST00000428982 HARBI1Q96MB7 349 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms