RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 VDAC2P45880 294 aaPredicted RBP12.85□□□□□ -0.35
TVP23C-203ENST00000428082 RPL23P62829 140 aaKnown RBP12.85□□□□□ -0.35
TVP23C-203ENST00000428082 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
TVP23C-203ENST00000428082 Q8TCH9 128 aa12.85□□□□□ -0.35
TVP23C-203ENST00000428082 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
TVP23C-203ENST00000428082 SDSLQ96GA7 329 aa12.85□□□□□ -0.35
TVP23C-203ENST00000428082 BTF3L4Q96K17 158 aa12.85□□□□□ -0.35
TVP23C-203ENST00000428082 RAB1BQ9H0U4 201 aa12.85□□□□□ -0.35
TVP23C-203ENST00000428082 IGHV3OR15-7A0A075B7D8 119 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 KBTBD11-OT1A0A1B0GTJ5 212 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 F6UZH7 168 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 H7BYZ3 331 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 LY6HO94772 140 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 RELBQ01201 579 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 FAM201AQ5SY85 155 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 ZNRF1Q8ND25 227 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 IGFBPL1Q8WX77 278 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 ENY2Q9NPA8 101 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 TMEM140Q9NV12 185 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 FBN2P35556 2912 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 LYNX1G3V0Z9 82 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 PAGE4O60829 102 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 LYNX1P0DP58 116 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 C16orf82Q7Z2V1 217 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 DDB2Q92466 427 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 CCL17Q92583 94 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 NRGNQ92686 78 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 PYGO2Q9BRQ0 406 aa12.84□□□□□ -0.35
TVP23C-203ENST00000428082 IGHV1-69-2A0A0G2JMI3 117 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 C11orf94C9JXX5 98 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 OVOL3O00110 214 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 HMGB3O15347 200 aaKnown RBP12.83□□□□□ -0.36
TVP23C-203ENST00000428082 NDUFS7O75251 213 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 YIF1AO95070 293 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 HRASP01112 189 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 COL8A2P25067 703 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 LINC00205P59089 165 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 RAB31Q13636 194 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 HNF4GQ14541 408 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 RPL39P5Q59GN2 51 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 SSX9Q7RTT3 188 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 GSN-AS1Q9NRJ2 163 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 PTPN13Q12923 2485 aa12.83□□□□□ -0.36
TVP23C-203ENST00000428082 ZNF729A6NN14 1252 aaPredicted RBP12.82□□□□□ -0.36
TVP23C-203ENST00000428082 C15orf61A6NNL5 157 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 PFN1P07737 140 aaKnown RBP12.82□□□□□ -0.36
TVP23C-203ENST00000428082 TRGC1P0CF51 173 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 IRF2P14316 349 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 SRP14P37108 136 aaKnown RBP12.82□□□□□ -0.36
TVP23C-203ENST00000428082 GALR1P47211 349 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 CORO2AQ92828 525 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 CCL19Q99731 98 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 NPVFQ9HCQ7 196 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 TMEM106BQ9NUM4 274 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 TCF19Q9Y242 345 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 FOXA2Q9Y261 457 aaPredicted RBP12.82□□□□□ -0.36
TVP23C-203ENST00000428082 SPG11Q96JI7 2443 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 NBPF19A0A087WUL8 3843 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 FNDC10F2Z333 226 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 GYPAP02724 150 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 CD99P14209 185 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 ZNF134P52741 427 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 ATP5IP56385 69 aaPredicted RBP12.82□□□□□ -0.36
TVP23C-203ENST00000428082 KRTAP10-9P60411 292 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 RPS16P62249 146 aaKnown RBP12.82□□□□□ -0.36
TVP23C-203ENST00000428082 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 STUMQ69YW2 141 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 KCNIP4Q6PIL6 250 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 TREML4Q6UXN2 200 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 Q8N7P7 452 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 NEU4Q8WWR8 484 aaPredicted RBP12.82□□□□□ -0.36
TVP23C-203ENST00000428082 LINC00574Q9H8X3 128 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 IDI2-AS1Q9NZ38 188 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 MIOXQ9UGB7 285 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 PITPNC1Q9UKF7 332 aa12.82□□□□□ -0.36
TVP23C-203ENST00000428082 PPP5D1E7EU14 171 aa12.81□□□□□ -0.36
TVP23C-203ENST00000428082 TMEM178BH3BS89 294 aa12.81□□□□□ -0.36
TVP23C-203ENST00000428082 CXorf1O96002 111 aa12.81□□□□□ -0.36
TVP23C-203ENST00000428082 HSPE1P61604 102 aaKnown RBP12.81□□□□□ -0.36
TVP23C-203ENST00000428082 MRPS11P82912 194 aaKnown RBP12.81□□□□□ -0.36
TVP23C-203ENST00000428082 POU2AF1Q16633 256 aa12.81□□□□□ -0.36
TVP23C-203ENST00000428082 FRZBQ92765 325 aa12.81□□□□□ -0.36
TVP23C-203ENST00000428082 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 TMPRSS2O15393 492 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 MT-CO2P00403 227 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 FAM3BP58499 235 aaPredicted RBP12.8□□□□□ -0.36
TVP23C-203ENST00000428082 CT45A1Q5HYN5 189 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 OR51G1Q8NGK1 321 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 CT45A3Q8NHU0 189 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 ABHD5Q8WTS1 349 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 RRHO14718 337 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 SPNS3Q6ZMD2 512 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 HIST3H2BBQ8N257 126 aa12.8□□□□□ -0.36
TVP23C-203ENST00000428082 DEFB108BQ8NET1 73 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms