RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TENM1Q9UKZ4 2725 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 A0A0G2JRQ6 117 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TEX50A0A1B0GTY4 177 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TEX22C9J3V5 150 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TCRBP04435 133 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 ELANEP08246 267 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 FGF2P09038 288 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 HLA-GP17693 338 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 VDAC1P21796 283 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 PSMB8P28062 276 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 RPL27AP46776 148 aaKnown RBP5.78□□□□□ -1.48
LINC01049-201ENST00000426840 ERVK-16P61578 105 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 RPL8P62917 257 aaKnown RBP5.78□□□□□ -1.48
LINC01049-201ENST00000426840 SLC35B1P78383 322 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 FOXE3Q13461 319 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 ASAH1Q13510 395 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 IZUMO4Q1ZYL8 232 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TMEM128Q5BJH2 165 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TEX38Q6PEX7 206 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 Q6ZRM9 215 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TMED4Q7Z7H5 227 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 SGPP2Q8IWX5 399 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 CENPSQ8N2Z9 138 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 COMMD1Q8N668 190 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 RNF152Q8N8N0 203 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 OR5T1Q8NG75 326 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 GRPEL2Q8TAA5 225 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 SRSF12Q8WXF0 261 aaKnown RBP5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TMEM68Q96MH6 324 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TMEM56Q96MV1 263 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 CITED2Q99967 270 aaPredicted RBP5.78□□□□□ -1.48
LINC01049-201ENST00000426840 KLK15Q9H2R5 256 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 NSG2Q9Y328 171 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 TMEM56-RWDD3S4R434 201 aa5.78□□□□□ -1.48
LINC01049-201ENST00000426840 A0A0B4J293 547 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 A0A1W2PN81 502 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 TCRBV4S1A1TA0A5B7 111 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 HMX3A6NHT5 357 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 CREBL2O60519 120 aaPredicted RBP5.77□□□□□ -1.49
LINC01049-201ENST00000426840 SNAPC5O75971 98 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 ACTL6BO94805 426 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 BRI3O95415 125 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 SFT2D2O95562 160 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 OPN1MWP04001 364 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 OPN1MW2P0DN77 364 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 OPN1MW3P0DN78 364 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 CHRNA7P36544 502 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 RAB9AP51151 201 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 OR2B8PP59922 312 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 PPP1R1AQ13522 171 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 ECSCRQ19T08 205 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 TRIM16LQ309B1 348 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 ANKRD55Q3KP44 614 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 TMEM268Q5VZI3 342 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 H2BFWTQ7Z2G1 175 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 ZNF695Q8IW36 515 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 TTC9CQ8N5M4 171 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 OR4X2Q8NGF9 303 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 MYOZ3Q8TDC0 251 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 ABHD5Q8WTS1 349 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 RBPMSQ93062 196 aaKnown RBP5.77□□□□□ -1.49
LINC01049-201ENST00000426840 IL22RA2Q969J5 263 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 GPR146Q96CH1 333 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 C20orf173Q96LM9 149 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 TSC22D3Q99576 134 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 SPIN2AQ99865 258 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 SPIN2BQ9BPZ2 258 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 ALX4Q9H161 411 aaPredicted RBP5.77□□□□□ -1.49
LINC01049-201ENST00000426840 ZFP57Q9NU63 452 aa5.77□□□□□ -1.49
LINC01049-201ENST00000426840 FOXA2Q9Y261 457 aaPredicted RBP5.77□□□□□ -1.49
LINC01049-201ENST00000426840 IGLC7A0M8Q6 106 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 C9orf170A2RU37 121 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 C15orf61A6NNL5 157 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 ATG12O94817 140 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 CRYGCP07315 174 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 OR4E1P0C645 316 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 TRAPPC2P0DI81 140 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 TRAPPC2BP0DI82 140 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 APELAP0DMC3 54 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 PF4V1P10720 104 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 ANXA7P20073 488 aaKnown RBP5.76□□□□□ -1.49
LINC01049-201ENST00000426840 CDX1P47902 265 aaPredicted RBP5.76□□□□□ -1.49
LINC01049-201ENST00000426840 UBE2MP61081 183 aaKnown RBP5.76□□□□□ -1.49
LINC01049-201ENST00000426840 HSPE1P61604 102 aaKnown RBP5.76□□□□□ -1.49
LINC01049-201ENST00000426840 KLK9Q2XQG4 91 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 CXorf66Q5JRM2 361 aaPredicted RBP5.76□□□□□ -1.49
LINC01049-201ENST00000426840 MZT2BQ6NZ67 158 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 C18orf65Q6ZTR6 163 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 LYZL2Q7Z4W2 148 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 NDUFA11Q86Y39 141 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 LGI3Q8N145 548 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 SLC35G3Q8N808 338 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 ZNF491Q8N8L2 437 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 LRTM2Q8N967 370 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 DUSP18Q8NEJ0 188 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 OR10W1Q8NGF6 305 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 OR5M8Q8NGP6 311 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 OR1L8Q8NGR8 309 aa5.76□□□□□ -1.49
LINC01049-201ENST00000426840 FAM110DQ8TAY7 271 aaPredicted RBP5.76□□□□□ -1.49
LINC01049-201ENST00000426840 CASTOR1Q8WTX7 329 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms