RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 TEX50A0A1B0GTY4 177 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 PPP5D1E7EU14 171 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 H0Y980 276 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 H3BMQ9 156 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 GGCTO75223 188 aaKnown RBP13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 RAB3DO95716 219 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 IGHV3-23P01764 117 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 CD74P04233 296 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 SERPINE2P07093 398 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 NHLRC4P0CG21 123 aaPredicted RBP13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 RND3P61587 244 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 IL18Q14116 193 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 STEAP1BQ6NZ63 245 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 IL34Q6ZMJ4 242 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 ISOC1Q96CN7 298 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 SIGLEC8Q9NYZ4 499 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
SLC6A1-202ENST00000425938 TRBV7-1A0A0A6YYK4 115 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 CSN3P07498 182 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 OR13C7P0DN81 318 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 PTBP1P26599 531 aaKnown RBP eCLIP13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 ARL3P36405 182 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 PPP5CP53041 499 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 PIGPP57054 158 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 MEF2DQ14814 521 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 SCGB2B2Q4G0G5 96 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 CLEC19AQ6UXS0 136 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 H2BFWTQ7Z2G1 175 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 GDPD1Q8N9F7 314 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 OR10W1Q8NGF6 305 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 OR5B3Q8NH48 314 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 TERB2Q8NHR7 220 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 ZFAND1Q8TCF1 268 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 NDUFA4L2Q9NRX3 87 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 S4R3C0 116 aa13.33□□□□□ -0.28
SLC6A1-202ENST00000425938 CTDSPLO15194 276 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 PI3P19957 117 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 MECP2P51608 486 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 LCN12Q6JVE5 192 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 CCDC71LQ8N9Z2 235 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 OR4D10Q8NGI6 311 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 OR4A16Q8NH70 328 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 CCDC140Q96MF4 163 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 COPZ2Q9P299 210 aa13.32□□□□□ -0.28
SLC6A1-202ENST00000425938 C15orf61A6NNL5 157 aa13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 OR2C1O95371 312 aa13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 HLA-AP01891 365 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 WT1-ASQ06250 92 aa13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 SLC25A24Q6NUK1 477 aa13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 MRGPRFQ96AM1 343 aa13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 SLIRPQ9GZT3 109 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 TMEM14BQ9NUH8 114 aa13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 RSL24D1Q9UHA3 163 aaKnown RBP13.31□□□□□ -0.28
SLC6A1-202ENST00000425938 MFSD2BA6NFX1 497 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 CCDC160A6NGH7 325 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 DISC1C4P0D8 188 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 ATG12O94817 140 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 FAM106AQ4KMX7 169 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 GPHB5Q86YW7 130 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 Q8N402 240 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 OR1L6Q8NGR2 347 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 OR13C8Q8NGS7 320 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 MCFD2Q8NI22 146 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 DYNLRB2Q8TF09 96 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 DMRT1Q9Y5R6 373 aa13.3□□□□□ -0.28
SLC6A1-202ENST00000425938 C3orf85A0A1B0GTC6 90 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 LGALS9O00182 355 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 IGKV1-39P01597 117 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 IGKV1D-39P04432 117 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 CLEC3BP05452 202 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 AKAIN1P0CW23 69 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 MARCH1Q8TCQ1 289 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 VN1R17PQ8TDU5 208 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 WWC2-AS2Q96NR7 200 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 ASCL2Q99929 193 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 C14orf166Q9Y224 244 aaKnown RBP13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 CEPT1Q9Y6K0 416 aa13.29□□□□□ -0.28
SLC6A1-202ENST00000425938 ZNF320A2RRD8 509 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 C2orf70A6NJV1 201 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 DBX1A6NMT0 343 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 CTSDP07339 412 aaPredicted RBP13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 GPR183P32249 361 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 AKR1C2P52895 323 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 TRIM16LQ309B1 348 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 FAAP20Q6NZ36 180 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 GTSCR1Q86UQ5 136 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 SGPP2Q8IWX5 399 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 ZNF502Q8TBZ5 544 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 TP53RKQ96S44 253 aa13.28□□□□□ -0.28
SLC6A1-202ENST00000425938 FABP12A6NFH5 140 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 GSTZ1O43708 216 aaPredicted RBP13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 B3GALNT1O75752 331 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 FRMD6-AS1P0C7T7 363 aa13.27□□□□□ -0.29
SLC6A1-202ENST00000425938 FOLR2P14207 255 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms