RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SPCS3P61009 180 aa18.92■□□□□ 0.62
APOE-202ENST00000425718 PRCDQ00LT1 54 aa18.92■□□□□ 0.62
APOE-202ENST00000425718 CFHR3Q02985 330 aa18.92■□□□□ 0.62
APOE-202ENST00000425718 C19orf54Q5BKX5 351 aa18.92■□□□□ 0.62
APOE-202ENST00000425718 CXorf66Q5JRM2 361 aaPredicted RBP18.92■□□□□ 0.62
APOE-202ENST00000425718 GGNBP1Q5YKI7 109 aa18.92■□□□□ 0.62
APOE-202ENST00000425718 OR1S1Q8NH92 325 aa18.92■□□□□ 0.62
APOE-202ENST00000425718 FAM110DQ8TAY7 271 aaPredicted RBP18.92■□□□□ 0.62
APOE-202ENST00000425718 WIPF2Q8TF74 440 aaPredicted RBP18.92■□□□□ 0.62
APOE-202ENST00000425718 SLA2Q9H6Q3 261 aa18.92■□□□□ 0.62
APOE-202ENST00000425718 A0A0G2JRQ6 117 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 DBX1A6NMT0 343 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 NPIPB5A8MRT5 1133 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 FAM90A26D6RGX4 464 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 ST8SIA3O43173 380 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 FBXO24O75426 580 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 BRI3O95415 125 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 OPN1MWP04001 364 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 OPN1MW2P0DN77 364 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 OPN1MW3P0DN78 364 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 PPIFP30405 207 aaKnown RBP18.91■□□□□ 0.62
APOE-202ENST00000425718 OXA1LQ15070 435 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 C10orf55Q5SWW7 151 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 TMEM65Q6PI78 240 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 TTC9CQ8N5M4 171 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 OR1L6Q8NGR2 347 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 ZNF747Q9BV97 191 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 HINT2Q9BX68 163 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 PLEKHA3Q9HB20 300 aa18.91■□□□□ 0.62
APOE-202ENST00000425718 FBN1P35555 2871 aaKnown RBP18.9■□□□□ 0.62
APOE-202ENST00000425718 TEX22C9J3V5 150 aa18.9■□□□□ 0.62
APOE-202ENST00000425718 G3V318 75 aa18.9■□□□□ 0.62
APOE-202ENST00000425718 MED6O75586 246 aa18.9■□□□□ 0.62
APOE-202ENST00000425718 LY86O95711 162 aa18.9■□□□□ 0.62
APOE-202ENST00000425718 SPNP16150 400 aa18.9■□□□□ 0.62
APOE-202ENST00000425718 ERHP84090 104 aaKnown RBP18.9■□□□□ 0.62
APOE-202ENST00000425718 PDLIM3Q53GG5 364 aaPredicted RBP18.9■□□□□ 0.62
APOE-202ENST00000425718 UXS1Q8NBZ7 420 aa18.9■□□□□ 0.62
APOE-202ENST00000425718 INS-IGF2F8WCM5 200 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 IGLV1-40P01703 118 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 TATDN3Q17R31 274 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 IZUMO4Q1ZYL8 232 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 Q6ZRM9 215 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 ZNF329Q86UD4 541 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 RNF152Q8N8N0 203 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 ZFP57Q9NU63 452 aa18.89■□□□□ 0.61
APOE-202ENST00000425718 CRYGCP07315 174 aa18.88■□□□□ 0.61
APOE-202ENST00000425718 HIST1H1BP16401 226 aaKnown RBP18.88■□□□□ 0.61
APOE-202ENST00000425718 PSMB6P28072 239 aa18.88■□□□□ 0.61
APOE-202ENST00000425718 SHISA2Q6UWI4 295 aa18.88■□□□□ 0.61
APOE-202ENST00000425718 IGLC7A0M8Q6 106 aa18.87■□□□□ 0.61
APOE-202ENST00000425718 C7orf66A4D0T2 115 aa18.87■□□□□ 0.61
APOE-202ENST00000425718 HMX3A6NHT5 357 aa18.87■□□□□ 0.61
APOE-202ENST00000425718 PSMB8P28062 276 aa18.87■□□□□ 0.61
APOE-202ENST00000425718 HOXA1P49639 335 aaPredicted RBP18.87■□□□□ 0.61
APOE-202ENST00000425718 ZNF355PQ9NSJ1 428 aa18.87■□□□□ 0.61
APOE-202ENST00000425718 E7EUB6 86 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 SSNA1O43805 119 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 PITX3O75364 302 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 ADAP1O75689 374 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 OR13C7P0DN81 318 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 PF4V1P10720 104 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 DEFA4P12838 97 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 MYOD1P15172 320 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 CTRB1P17538 263 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 SUB1P53999 127 aaKnown RBP eCLIP18.86■□□□□ 0.61
APOE-202ENST00000425718 TNFRSF9Q07011 255 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 ASPHD1Q5U4P2 390 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 CTRB2Q6GPI1 263 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 GSG1LQ6UXU4 331 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 OR5T1Q8NG75 326 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 MDFIQ99750 246 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 THYN1Q9P016 225 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 HSPB7Q9UBY9 170 aa18.86■□□□□ 0.61
APOE-202ENST00000425718 TSSC4Q9Y5U2 329 aaPredicted RBP18.86■□□□□ 0.61
APOE-202ENST00000425718 C5orf51A6NDU8 294 aa18.85■□□□□ 0.61
APOE-202ENST00000425718 CGB1A6NKQ9 187 aa18.85■□□□□ 0.61
APOE-202ENST00000425718 CEBPZOSA8MTT3 80 aa18.85■□□□□ 0.61
APOE-202ENST00000425718 IAH1Q2TAA2 248 aaPredicted RBP18.85■□□□□ 0.61
APOE-202ENST00000425718 NOXA1Q86UR1 476 aa18.85■□□□□ 0.61
APOE-202ENST00000425718 CITED1Q99966 193 aa18.85■□□□□ 0.61
APOE-202ENST00000425718 HIPK2Q9H2X6 1198 aa18.85■□□□□ 0.61
APOE-202ENST00000425718 A0A0G2JLM5 398 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 A0A1B0GW64 132 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 TCRBV4S1A1TA0A5B7 111 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 SNCAP37840 140 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 RAB9AP51151 201 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 CD83Q01151 205 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 FAM209BQ5JX69 171 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 OR2C3Q8N628 320 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 ZNF114Q8NC26 417 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 SPATA3Q8NHX4 192 aa18.84■□□□□ 0.61
APOE-202ENST00000425718 CIB3Q96Q77 187 aaPredicted RBP18.84■□□□□ 0.61
APOE-202ENST00000425718 FAM223BA6NKX1 122 aa18.83■□□□□ 0.6
APOE-202ENST00000425718 APELAP0DMC3 54 aa18.83■□□□□ 0.6
APOE-202ENST00000425718 AREGP15514 252 aa18.83■□□□□ 0.6
APOE-202ENST00000425718 ATP5IP56385 69 aaPredicted RBP18.83■□□□□ 0.6
APOE-202ENST00000425718 CYCSP99999 105 aaKnown RBP18.83■□□□□ 0.6
APOE-202ENST00000425718 NDUFA11Q86Y39 141 aa18.83■□□□□ 0.6
APOE-202ENST00000425718 FAM223AQ8IWN6 122 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms