RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 LRRC30A6NM36 301 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 FAM90A26D6RGX4 464 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 BSXQ3C1V8 233 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 CST9LP1Q5W188 147 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 PRR7Q8TB68 274 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 A0A0U1RQK1 487 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 IFNA1P01562 189 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 FAM201AQ5SY85 155 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 SAMD13Q5VXD3 122 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 CD177Q8N6Q3 437 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 STPG4Q8N801 248 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 PYGO2Q9BRQ0 406 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 SRD5A3Q9H8P0 318 aa10.77□□□□□ -0.69
COL12A1-205ENST00000425443 PATZ1Q9HBE1 687 aaKnown RBP10.77□□□□□ -0.69
COL12A1-205ENST00000425443 PTPRBP23467 1997 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 IGLV1-44P01699 117 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 GALR1P47211 349 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 FBLN7Q53RD9 439 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 MBNL2Q5VZF2 373 aaKnown RBP10.76□□□□□ -0.69
COL12A1-205ENST00000425443 UNQ5815/PRO19632Q6UWF5 114 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 MOGAT3Q86VF5 341 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 TMEM183AQ8IXX5 376 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 Q8N7P7 452 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 OR2V2Q96R30 315 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 AGMATQ9BSE5 352 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 POLR3KQ9Y2Y1 108 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-205ENST00000425443 TNFSF4P23510 183 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 PSMB3P49720 205 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 GNB2P62879 340 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 VAMP3Q15836 100 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 C1orf194Q5T5A4 169 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 CENPVQ7Z7K6 275 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-205ENST00000425443 HSD17B10Q99714 261 aaKnown RBP10.76□□□□□ -0.69
COL12A1-205ENST00000425443 DERL1Q9BUN8 251 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 QTRT1Q9BXR0 403 aaKnown RBP10.76□□□□□ -0.69
COL12A1-205ENST00000425443 PITPNC1Q9UKF7 332 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 SLC25A15Q9Y619 301 aa10.76□□□□□ -0.69
COL12A1-205ENST00000425443 A0A1B0GV72 72 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 PGPEP1LA6NFU8 196 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 IQCJQ1A5X6 159 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 PRR27Q6MZM9 219 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 C1orf174Q8IYL3 243 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 CTDSP1Q9GZU7 261 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 CLDN14O95500 239 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 ADH4P08319 380 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 HERV-K104P63124 156 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 TMEM177Q53S58 311 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 RPL39P5Q59GN2 51 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 TRAT1Q6PIZ9 186 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 ZNRF1Q8ND25 227 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 OR1P1Q8NH06 330 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 NPCDR1Q9BY65 106 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 RPRMLQ8N4K4 120 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 CIB3Q96Q77 187 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-205ENST00000425443 NAGKQ9UJ70 344 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 HCFC1P51610 2035 aa10.75□□□□□ -0.69
COL12A1-205ENST00000425443 KALRNO60229 2985 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 A0A1B0GW15 77 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 H7BYZ3 331 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 M0R1X1 148 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 KLK10O43240 276 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 GCGP01275 180 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 GYPAP02724 150 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 FAM3BP58499 235 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-205ENST00000425443 PMS2P11Q13670 270 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 UTF1Q5T230 341 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 ZNF66Q6ZN08 573 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 FUT9Q9Y231 359 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 CTXND1A0A1B0GTU2 59 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 MBD3L4A6NDZ8 208 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-205ENST00000425443 MBD3L3A6NE82 208 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-205ENST00000425443 MBD3L5A6NJ08 208 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-205ENST00000425443 CGAP01215 116 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 SEM1Q6ZVN7 128 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 BOD1L2Q8IYS8 172 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 ZNF114Q8NC26 417 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 DEFB108BQ8NET1 73 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 MBD3L2Q8NHZ7 208 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-205ENST00000425443 TMEM147Q9BVK8 224 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 HEYLQ9NQ87 328 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-205ENST00000425443 PAM16Q9Y3D7 125 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 TIMM9Q9Y5J7 89 aa10.74□□□□□ -0.69
COL12A1-205ENST00000425443 MGST3O14880 152 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 RAB29O14966 203 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 PSG1P11464 419 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 ATP5G3P48201 142 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 SPRNQ5BIV9 151 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 TMEM144Q7Z5S9 345 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 IGKV1D-17A0A075B6S4 117 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 K7ERU9 68 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 OR9G9P0C7N8 305 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 RAB9AP51151 201 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 ERVK-16P61578 105 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 TIMM23BQ5SRD1 257 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 ZNF474Q6S9Z5 364 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-205ENST00000425443 TCTEX1D1Q8N7M0 179 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 OR4A16Q8NH70 328 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 ORAOV1Q8WV07 137 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms