RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CT45A7P0DMV0 189 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 LINC00205P59089 165 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 TMEM267Q0VDI3 215 aaPredicted RBP12.58□□□□□ -0.4
SHOX2-202ENST00000425436 DEFB112Q30KQ8 113 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 Q6ZRG5 221 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 LHFPL4Q7Z7J7 247 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 LFNGQ8NES3 379 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 OR10P1Q8NGE3 313 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 OSR1Q8TAX0 266 aaPredicted RBP12.58□□□□□ -0.4
SHOX2-202ENST00000425436 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
SHOX2-202ENST00000425436 SLC35D1Q9NTN3 355 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 TMEM140Q9NV12 185 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 FKBP11Q9NYL4 201 aa12.58□□□□□ -0.4
SHOX2-202ENST00000425436 CRYZL1O95825 349 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 TSPAN15O95858 294 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 ZNF137PP52743 207 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 PRRX1P54821 245 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 LGALS4P56470 323 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 BPIFB3P59826 476 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 SERF2P84101 59 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 LDLRAD2Q5SZI1 272 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 C9orf139Q6ZV77 190 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 AJUBAQ96IF1 538 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 RHOVQ96L33 236 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 PSMG3Q9BT73 122 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-202ENST00000425436 PRNDQ9UKY0 176 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 BTBD17A6NE02 478 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 ODF3BA8MYP8 253 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 OR9G9P0C7N8 305 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 RAB2AP61019 212 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 RELBQ01201 579 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 SLC38A11Q08AI6 406 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 LRRC75BQ2VPJ9 315 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 AKR1C8PQ5T2L2 129 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 SIGLECL1Q8N7X8 197 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 QTRT1Q9BXR0 403 aaKnown RBP12.57□□□□□ -0.4
SHOX2-202ENST00000425436 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 FOXA2Q9Y261 457 aaPredicted RBP12.57□□□□□ -0.4
SHOX2-202ENST00000425436 FAM96BQ9Y3D0 163 aa12.57□□□□□ -0.4
SHOX2-202ENST00000425436 JMJD1CQ15652 2540 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 MC5RP33032 325 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 ATP5IP56385 69 aaPredicted RBP12.56□□□□□ -0.4
SHOX2-202ENST00000425436 TMEM182Q6ZP80 229 aaPredicted RBP12.56□□□□□ -0.4
SHOX2-202ENST00000425436 BPIFCQ8NFQ6 507 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 OR5AN1Q8NGI8 311 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 LINC00052Q96N35 136 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 TMEM147Q9BVK8 224 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 GGACTQ9BVM4 153 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 SH3BGRL3Q9H299 93 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 ZNF257Q9Y2Q1 563 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 TIMM9Q9Y5J7 89 aa12.56□□□□□ -0.4
SHOX2-202ENST00000425436 TMEM218A2RU14 115 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 C15orf61A6NNL5 157 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 SOX15O60248 233 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 IGLV1-47P01700 117 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 RAB13P51153 203 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 HSPE1P61604 102 aaKnown RBP12.55□□□□□ -0.4
SHOX2-202ENST00000425436 SRSF2Q01130 221 aaKnown RBP12.55□□□□□ -0.4
SHOX2-202ENST00000425436 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 TUSC1Q2TAM9 212 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 OR4A47Q6IF82 309 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 SSX9Q7RTT3 188 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 THNSL2Q86YJ6 484 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 PDPNQ86YL7 162 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 DYNAPQ8N1N2 210 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 OR4P4Q8NGL7 312 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 OR4A5Q8NH83 315 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 ZDHHC16Q969W1 377 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 PBDC1Q9BVG4 233 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 SMDT1Q9H4I9 107 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 ENY2Q9NPA8 101 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 TMEM14BQ9NUH8 114 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 BET1LQ9NYM9 111 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 HILPDAQ9Y5L2 63 aa12.55□□□□□ -0.4
SHOX2-202ENST00000425436 HBE1P02100 147 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 IL6RP08887 468 aaPredicted RBP12.54□□□□□ -0.4
SHOX2-202ENST00000425436 HTR1DP28221 377 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 RAB11AP62491 216 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 PEA15Q15121 130 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 SSX2Q16385 188 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 VSTM2AQ8TAG5 236 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 NARS2Q96I59 477 aaKnown RBP12.54□□□□□ -0.4
SHOX2-202ENST00000425436 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 OR4C12Q96R67 309 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 WDR61Q9GZS3 305 aaKnown RBP12.54□□□□□ -0.4
SHOX2-202ENST00000425436 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
SHOX2-202ENST00000425436 BUB1B-PAK6H3BSN5 160 aa12.53□□□□□ -0.4
SHOX2-202ENST00000425436 UPK2O00526 184 aa12.53□□□□□ -0.4
SHOX2-202ENST00000425436 ARL16Q0P5N6 197 aa12.53□□□□□ -0.4
SHOX2-202ENST00000425436 HLA-DRB5Q30154 266 aa12.53□□□□□ -0.4
SHOX2-202ENST00000425436 TMEM177Q53S58 311 aa12.53□□□□□ -0.4
SHOX2-202ENST00000425436 OR8G2PQ6IF36 304 aa12.53□□□□□ -0.4
SHOX2-202ENST00000425436 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
SHOX2-202ENST00000425436 CENPVQ7Z7K6 275 aaPredicted RBP12.53□□□□□ -0.4
SHOX2-202ENST00000425436 PRIMA1Q86XR5 153 aa12.53□□□□□ -0.4
SHOX2-202ENST00000425436 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms