RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 SOX15O60248 233 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 DUS4LO95620 317 aaKnown RBP13.29□□□□□ -0.28
FOXN4-203ENST00000423960 PSMB8P28062 276 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 HIST2H2BDQ6DRA6 164 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 THOC7Q6I9Y2 204 aaKnown RBP13.29□□□□□ -0.28
FOXN4-203ENST00000423960 Q6ZRM9 215 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 TTC9CQ8N5M4 171 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 COQ8AQ8NI60 647 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 SRSF8Q9BRL6 282 aaKnown RBP13.29□□□□□ -0.28
FOXN4-203ENST00000423960 NDUFA4L2Q9NRX3 87 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.29□□□□□ -0.28
FOXN4-203ENST00000423960 ZNF257Q9Y2Q1 563 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 TNCP24821 2201 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 PF4V1P10720 104 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 HSPE1P61604 102 aaKnown RBP13.28□□□□□ -0.28
FOXN4-203ENST00000423960 ZNF429Q86V71 674 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 RNF152Q8N8N0 203 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 OR52B4Q8NGK2 314 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 FAM110DQ8TAY7 271 aaPredicted RBP13.28□□□□□ -0.28
FOXN4-203ENST00000423960 HINT2Q9BX68 163 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 KLK15Q9H2R5 256 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 ZNF355PQ9NSJ1 428 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 ZFP57Q9NU63 452 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 CACNG5Q9UF02 275 aa13.28□□□□□ -0.28
FOXN4-203ENST00000423960 TSSC4Q9Y5U2 329 aaPredicted RBP13.28□□□□□ -0.28
FOXN4-203ENST00000423960 INMT-MINDY4F8WBC2 141 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 IL5P05113 134 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 RPLP1P05386 114 aaKnown RBP13.27□□□□□ -0.29
FOXN4-203ENST00000423960 RAB9AP51151 201 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.29
FOXN4-203ENST00000423960 NMSQ5H8A3 153 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 PRR31Q5SQ13 230 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 LCNL1Q6ZST4 164 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 NDUFA11Q86Y39 141 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 MITD1Q8WV92 249 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 MS4A10Q96PG2 267 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 SEC22CQ9BRL7 303 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 COA4Q9NYJ1 87 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 TMED3Q9Y3Q3 217 aa13.27□□□□□ -0.29
FOXN4-203ENST00000423960 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 H3BUA1 57 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 ST8SIA3O43173 380 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 IFNA17P01571 189 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 HOXB5P09067 269 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 SULT1A3P0DMM9 295 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 SULT1A4P0DMN0 295 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 AREGP15514 252 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 PSMB6P28072 239 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 NSUN5P1Q3KNT7 163 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 KHDC1LQ5JSQ8 128 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
FOXN4-203ENST00000423960 ZNF431Q8TF32 576 aaPredicted RBP13.26□□□□□ -0.29
FOXN4-203ENST00000423960 MARVELD1Q9BSK0 173 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 PDCD10Q9BUL8 212 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 SLA2Q9H6Q3 261 aa13.26□□□□□ -0.29
FOXN4-203ENST00000423960 A0A1B0GU03 582 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 IGLC7A0M8Q6 106 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 BRI3O95415 125 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 PTTG1O95997 202 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 REG1AP05451 166 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 CRYGCP07315 174 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 OR13C7P0DN81 318 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 SPNP16150 400 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 CTRB1P17538 263 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 PRCDQ00LT1 54 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 SMCO1Q147U7 214 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 CTRB2Q6GPI1 263 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 MRPL41Q8IXM3 137 aaKnown RBP13.25□□□□□ -0.29
FOXN4-203ENST00000423960 OR52E5Q8NH55 327 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 CACFD1Q9UGQ2 172 aa13.25□□□□□ -0.29
FOXN4-203ENST00000423960 A0A1W2PRX2 142 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 DHFRP00374 187 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 IFNA21P01568 189 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 TRGV3P03979 118 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 SLC25A6P12236 298 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 SPCS3P61009 180 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 RPL23AP62750 156 aaKnown RBP13.24□□□□□ -0.29
FOXN4-203ENST00000423960 WT1-ASQ06250 92 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 KIAA0141Q14154 515 aaPredicted RBP13.24□□□□□ -0.29
FOXN4-203ENST00000423960 AARDQ4LEZ3 155 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 GGNBP1Q5YKI7 109 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 ZNF491Q8N8L2 437 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 PLEKHA3Q9HB20 300 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 GPN1Q9HCN4 374 aaPredicted RBP13.24□□□□□ -0.29
FOXN4-203ENST00000423960 MGAM2Q2M2H8 2515 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 PKD1L1Q8TDX9 2849 aa13.24□□□□□ -0.29
FOXN4-203ENST00000423960 ADARB2-AS1A8MUL3 147 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 PRAF2O60831 178 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 ADAP1O75689 374 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 PRH1P02810 166 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 DEFA4P12838 97 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 CDX1P47902 265 aaPredicted RBP13.23□□□□□ -0.29
FOXN4-203ENST00000423960 TPPP2P59282 170 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 ERHP84090 104 aaKnown RBP13.23□□□□□ -0.29
FOXN4-203ENST00000423960 SPINK9Q5DT21 86 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 C12orf45Q8N5I9 185 aaPredicted RBP13.23□□□□□ -0.29
FOXN4-203ENST00000423960 UXS1Q8NBZ7 420 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 OR1S1Q8NH92 325 aa13.23□□□□□ -0.29
FOXN4-203ENST00000423960 MYOZ3Q8TDC0 251 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms