RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 TMEM140Q9NV12 185 aa7.56□□□□□ -1.2
HERC3-204ENST00000422770 SHPKQ9UHJ6 478 aa7.56□□□□□ -1.2
HERC3-204ENST00000422770 C13orf42A0A1B0GVH6 325 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 CCL24O00175 119 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 RBMXL2O75526 392 aaKnown RBP7.55□□□□□ -1.2
HERC3-204ENST00000422770 NXPH3O95157 252 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 SCGB1D2O95969 90 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 HPRT1P00492 218 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 KRASP01116 189 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 IGHV3-11P01762 117 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 TRGV3P03979 118 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 SULT1A3P0DMM9 295 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 SULT1A4P0DMN0 295 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 EGR2P11161 476 aaPredicted RBP7.55□□□□□ -1.2
HERC3-204ENST00000422770 NQO2P16083 231 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 PSMB8P28062 276 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 RAB9AP51151 201 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 BRWD1-AS2P59051 145 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 PRSS8Q16651 343 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 IZUMO4Q1ZYL8 232 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 IAH1Q2TAA2 248 aaPredicted RBP7.55□□□□□ -1.2
HERC3-204ENST00000422770 OXLD1Q5BKU9 147 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 GSG1LQ6UXU4 331 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 H2BFWTQ7Z2G1 175 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 AKAP14Q86UN6 197 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 MMD2Q8IY49 270 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 VSTM2AQ8TAG5 236 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 C4orf3Q8WVX3 66 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 RHOVQ96L33 236 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 TMEM56Q96MV1 263 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 FYTTD1Q96QD9 318 aaKnown RBP7.55□□□□□ -1.2
HERC3-204ENST00000422770 SPIN2AQ99865 258 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 SPIN2BQ9BPZ2 258 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 ZNF430Q9H8G1 570 aaPredicted RBP7.55□□□□□ -1.2
HERC3-204ENST00000422770 PLEKHA2Q9HB19 425 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 FAM212BQ9NTI7 297 aaPredicted RBP7.55□□□□□ -1.2
HERC3-204ENST00000422770 CACNG5Q9UF02 275 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 ZNF580Q9UK33 172 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 TMEM56-RWDD3S4R434 201 aa7.55□□□□□ -1.2
HERC3-204ENST00000422770 PIGBOS1A0A0B4J2F0 54 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 MPTX1A8MV57 137 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 WIPF1O43516 503 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 KBTBD11O94819 623 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 OR2A4O95047 310 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 CDS2O95674 445 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 CRYGBP07316 175 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 TRAPPC2P0DI81 140 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 TRAPPC2BP0DI82 140 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 CXCL3P19876 107 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 PPIFP30405 207 aaKnown RBP7.54□□□□□ -1.2
HERC3-204ENST00000422770 MYCNOSP40205 109 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 CDX1P47902 265 aaPredicted RBP7.54□□□□□ -1.2
HERC3-204ENST00000422770 S100A10P60903 97 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 DEFA5Q01523 94 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 AKIRIN2Q53H80 203 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 C10orf55Q5SWW7 151 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 MRPL41Q8IXM3 137 aaKnown RBP7.54□□□□□ -1.2
HERC3-204ENST00000422770 LRTM2Q8N967 370 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 OR1S1Q8NH92 325 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 SRSF12Q8WXF0 261 aaKnown RBP7.54□□□□□ -1.2
HERC3-204ENST00000422770 DPF1Q92782 380 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 SEC22AQ96IW7 307 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 OR2A7Q96R45 310 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 GNB4Q9HAV0 340 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 TMED3Q9Y3Q3 217 aa7.54□□□□□ -1.2
HERC3-204ENST00000422770 HMX3A6NHT5 357 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 SOX15O60248 233 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 IGLV1-40P01703 118 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 PRB2P02812 416 aaPredicted RBP7.53□□□□□ -1.2
HERC3-204ENST00000422770 OR9G9P0C7N8 305 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
HERC3-204ENST00000422770 CRIP2P52943 208 aaPredicted RBP7.53□□□□□ -1.2
HERC3-204ENST00000422770 LRRC37A5PQ49AS3 106 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 NMSQ5H8A3 153 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 OR4A47Q6IF82 309 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 LINC00482Q8N8I6 264 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 ZNF491Q8N8L2 437 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 RNF152Q8N8N0 203 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 ZBTB8BQ8NAP8 495 aaPredicted RBP7.53□□□□□ -1.2
HERC3-204ENST00000422770 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 GPR146Q96CH1 333 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 UBE2E2Q96LR5 201 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 AIFM2Q9BRQ8 373 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 GSKIPQ9P0R6 139 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 NSG2Q9Y328 171 aa7.53□□□□□ -1.2
HERC3-204ENST00000422770 ANKRD34BA5PLL1 514 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 C15orf61A6NNL5 157 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 PFDN1O60925 122 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 CCNKO75909 580 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 SNAPC5O75971 98 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 PRH1P02810 166 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 GIPP09681 153 aaPredicted RBP7.52□□□□□ -1.21
HERC3-204ENST00000422770 MYOD1P15172 320 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 H2BFSP57053 126 aa7.52□□□□□ -1.21
HERC3-204ENST00000422770 RPL8P62917 257 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms