RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, human

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-208	ENST00000422080	TMEM213	A2RRL7	107 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080		A8MWP6	167 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	TPPP	O94811	219 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	KRAS	P01116	189 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	OR13C7	P0DN81	318 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	ELK1	P19419	428 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	S100G	P29377	79 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	CD81	P60033	236 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	TSPAN5	P62079	268 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	CASC10	Q5T4H9	136 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	GDPD1	Q8N9F7	314 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	OR10W1	Q8NGF6	305 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	VN1R17P	Q8TDU5	208 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	NDUFA4L2	Q9NRX3	87 aa		13.4	□□□□□ -0.26
HDLBP-208	ENST00000422080	HPGDS	O60760	199 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	SNAPC5	O75971	98 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	SERPINE2	P07093	398 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	LYL1	P12980	280 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	EDN2	P20800	178 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	RCVRN	P35243	200 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	UCP3	P55916	312 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	WT1-AS	Q06250	92 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	GUCA2B	Q16661	112 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	MZT2A	Q6P582	158 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	SNX29P2	Q8IUI4	249 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	FKBP11	Q9NYL4	201 aa		13.39	□□□□□ -0.27
HDLBP-208	ENST00000422080	GPR183	P32249	361 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	G6PC	P35575	357 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	PHLDA2	Q53GA4	152 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	ZNF57	Q68EA5	555 aa	Predicted RBP	13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	PLET1	Q6UQ28	207 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	UXS1	Q8NBZ7	420 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	AP3S1	Q92572	193 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	LSM10	Q969L4	123 aa	Known RBP	13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	MARC2	Q969Z3	335 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	ATP6V0B	Q99437	205 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	EDA2R	Q9HAV5	297 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	PLEKHA3	Q9HB20	300 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	PALMD	Q9NP74	551 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	PRND	Q9UKY0	176 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	OR51B2	Q9Y5P1	312 aa		13.38	□□□□□ -0.27
HDLBP-208	ENST00000422080	IFNA6	P05013	189 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	CD7	P09564	240 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	C8orf88	P0DMB2	117 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	ELL	P55199	621 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	SLC25A24	Q6NUK1	477 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	SLC38A6	Q8IZM9	456 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	OR1L6	Q8NGR2	347 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	OR5B3	Q8NH48	314 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	CACNG8	Q8WXS5	425 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	WDR89	Q96FK6	387 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	TSC22D3	Q99576	134 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	NSG2	Q9Y328	171 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	F11R	Q9Y624	299 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	CEPT1	Q9Y6K0	416 aa		13.37	□□□□□ -0.27
HDLBP-208	ENST00000422080	OR11H12	B2RN74	326 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	TGOLN2	O43493	480 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	GABARAP	O95166	117 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	ZNF182	P17025	639 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	CTF1	Q16619	201 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	TM4SF20	Q53R12	229 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	UNQ9165/PRO28630	Q6UXU0	137 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	TBC1D26	Q86UD7	250 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	ISOC1	Q96CN7	298 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	TMEM56	Q96MV1	263 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	HINT2	Q9BX68	163 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	TMEM14B	Q9NUH8	114 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	MRPL27	Q9P0M9	148 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	MLX	Q9UH92	298 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	UFC1	Q9Y3C8	167 aa		13.36	□□□□□ -0.27
HDLBP-208	ENST00000422080	TRAV25	A0A0B4J276	109 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	FAM25A	B3EWG3	89 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	FAM25C	B3EWG5	89 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	FAM25G	B3EWG6	89 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	SMIM18	P0DKX4	95 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	SLC16A13	Q7RTY0	426 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	TMEM61	Q8N0U2	210 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	DEFB125	Q8N687	156 aa		13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	NAA50	Q9GZZ1	169 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-208	ENST00000422080	RBMY1B	A6NDE4	496 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	RBMY1E	A6NEQ0	496 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	C15orf61	A6NNL5	157 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	RBMY1D	P0C7P1	496 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	MFAP2	P55001	183 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	ANKRD55	Q3KP44	614 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	SPSB3	Q6PJ21	355 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	C15orf40	Q8WUR7	153 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	BSCL2	Q96G97	398 aa	Predicted RBP	13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	SEC22A	Q96IW7	307 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	HIPK2	Q9H2X6	1198 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	C21orf62	Q9NYP8	219 aa		13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-208	ENST00000422080	DBX1	A6NMT0	343 aa		13.33	□□□□□ -0.28
HDLBP-208	ENST00000422080	H2BFWT	Q7Z2G1	175 aa		13.33	□□□□□ -0.28
HDLBP-208	ENST00000422080	OR1P1	Q8NH06	330 aa		13.33	□□□□□ -0.28
HDLBP-208	ENST00000422080	OR4A16	Q8NH70	328 aa		13.33	□□□□□ -0.28
HDLBP-208	ENST00000422080	SCARB1	Q8WTV0	552 aa		13.33	□□□□□ -0.28
HDLBP-208	ENST00000422080	TMEM190	Q8WZ59	177 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms