RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 FCAMRQ8WWV6 532 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 EEF1AKMT3Q96AZ1 226 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 ZNF414Q96IQ9 312 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 CMTM3Q96MX0 182 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 SRSF8Q9BRL6 282 aaKnown RBP8.31□□□□□ -1.08
SSBP3-206ENST00000420121 QTRT1Q9BXR0 403 aaKnown RBP8.31□□□□□ -1.08
SSBP3-206ENST00000420121 NAA50Q9GZZ1 169 aaKnown RBP8.31□□□□□ -1.08
SSBP3-206ENST00000420121 WFDC10AQ9H1F0 79 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 VCX3AQ9NNX9 186 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 COMMD3Q9UBI1 195 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 SELENOKQ9Y6D0 94 aa8.31□□□□□ -1.08
SSBP3-206ENST00000420121 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 DHFRP00374 187 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 CBLN1P23435 193 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 HLA-DMAP28067 261 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 LPAR6P43657 344 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 UNQ9165/PRO28630Q6UXU0 137 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 GTSCR1Q86UQ5 136 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 LAX1Q8IWV1 398 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 GDPD1Q8N9F7 314 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 DMBX1Q8NFW5 382 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 BORCS5Q969J3 196 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 DGCR14Q96DF8 476 aaKnown RBP8.3□□□□□ -1.08
SSBP3-206ENST00000420121 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-206ENST00000420121 NEURL2Q9BR09 285 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 COMMD5Q9GZQ3 224 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 PLEKHA3Q9HB20 300 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 NDUFA4L2Q9NRX3 87 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 MLXQ9UH92 298 aa8.3□□□□□ -1.08
SSBP3-206ENST00000420121 TRBV7-1A0A0A6YYK4 115 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 RBMY1BA6NDE4 496 aaKnown RBP8.29□□□□□ -1.08
SSBP3-206ENST00000420121 RBMY1EA6NEQ0 496 aaKnown RBP8.29□□□□□ -1.08
SSBP3-206ENST00000420121 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-206ENST00000420121 GPR31O00270 319 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 HPGDSO60760 199 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 KRASP01116 189 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 IGKV1-39P01597 117 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 IGKV1D-39P04432 117 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 CLEC3BP05452 202 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 SERPINE2P07093 398 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 RBMY1DP0C7P1 496 aaKnown RBP8.29□□□□□ -1.08
SSBP3-206ENST00000420121 C8orf88P0DMB2 117 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 DEFA4P12838 97 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 PTBP1P26599 531 aaKnown RBP eCLIP8.29□□□□□ -1.08
SSBP3-206ENST00000420121 GPR183P32249 361 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 G6PCP35575 357 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 CD81P60033 236 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 CTF1Q16619 201 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 TMEM61Q8N0U2 210 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 DEFB125Q8N687 156 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 OR6F1Q8NGZ6 308 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 DYNLRB2Q8TF09 96 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 CXorf58Q96LI9 332 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 SPATA25Q9BR10 227 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 SCPEP1Q9HB40 452 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 TECRQ9NZ01 308 aaKnown RBP8.29□□□□□ -1.08
SSBP3-206ENST00000420121 NSG2Q9Y328 171 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 DNAH1Q9P2D7 4330 aa8.29□□□□□ -1.08
SSBP3-206ENST00000420121 GABARAPO95166 117 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 TRAPPC2P0DI81 140 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 TRAPPC2BP0DI82 140 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 OR13C7P0DN81 318 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 PHLDA2Q53GA4 152 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 TM4SF20Q53R12 229 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 THOC7Q6I9Y2 204 aaKnown RBP8.28□□□□□ -1.08
SSBP3-206ENST00000420121 SNX29P2Q8IUI4 249 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 UXS1Q8NBZ7 420 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 OR1L8Q8NGR8 309 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 SEC22AQ96IW7 307 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 ZNF436Q9C0F3 470 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-206ENST00000420121 HIPK2Q9H2X6 1198 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 RETNQ9HD89 108 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 FAM212BQ9NTI7 297 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-206ENST00000420121 TMEM14BQ9NUH8 114 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 CEPT1Q9Y6K0 416 aa8.28□□□□□ -1.08
SSBP3-206ENST00000420121 RYR2Q92736 4967 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 IGHV3-35A0A0C4DH35 117 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 K7EIM0 57 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 TGOLN2O43493 480 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 RCVRNP35243 200 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 UCP3P55916 312 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 ERVK-16P61578 105 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 FAM106AQ4KMX7 169 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 TBC1D26Q86UD7 250 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 LHFPL1Q86WI0 220 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 CMTM1Q8IZ96 169 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 VN1R17PQ8TDU5 208 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 LSM10Q969L4 123 aaKnown RBP8.27□□□□□ -1.09
SSBP3-206ENST00000420121 TUBA4BQ9H853 241 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 GAR1Q9NY12 217 aaKnown RBP8.27□□□□□ -1.09
SSBP3-206ENST00000420121 SLC2A8Q9NY64 477 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 OR51B2Q9Y5P1 312 aa8.27□□□□□ -1.09
SSBP3-206ENST00000420121 F11RQ9Y624 299 aaKnown RBP8.27□□□□□ -1.09
SSBP3-206ENST00000420121 IGHV3-21A0A0B4J1V1 117 aa8.26□□□□□ -1.09
SSBP3-206ENST00000420121 SMIM31A0A1B0GVY4 71 aa8.26□□□□□ -1.09
SSBP3-206ENST00000420121 ZNF320A2RRD8 509 aa8.26□□□□□ -1.09
SSBP3-206ENST00000420121 C15orf61A6NNL5 157 aa8.26□□□□□ -1.09
SSBP3-206ENST00000420121 OR11H12B2RN74 326 aa8.26□□□□□ -1.09
SSBP3-206ENST00000420121 M0QYG6 137 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms