RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MYOD1P15172 320 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 CHRNA7P36544 502 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 REG1BP48304 166 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 EFNA4P52798 201 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 ELLP55199 621 aaPredicted RBP7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 HABP2Q14520 560 aaPredicted RBP7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 ACOT6Q3I5F7 207 aaPredicted RBP7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 VMA21Q3ZAQ7 101 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 FFAR4Q5NUL3 377 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 PVRIGQ6DKI7 326 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 FAM122AQ96E09 287 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 P2RX4Q99571 388 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 MGST2Q99735 147 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 RARRES2Q99969 163 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 SSBP3Q9BWW4 388 aaPredicted RBP7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 GGTLC1Q9BX51 225 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 ACTR3CQ9C0K3 210 aaPredicted RBP7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 NPVFQ9HCQ7 196 aa7.31□□□□□ -1.24
LINCMD1-201ENST00000418518 LOC105371242A0A075B767 164 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 IGHV1-3A0A0C4DH29 117 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 A0A1B0GV50 99 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 A0A1W2PPI3 338 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 CGB1A6NKQ9 187 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 YIF1AO95070 293 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 IFNA1P01562 189 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 IFNA4P05014 189 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 PRTN3P24158 256 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 MAS1LP35410 378 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 GPR6P46095 362 aaPredicted RBP7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 RPL29P47914 159 aaKnown RBP7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 RPS16P62249 146 aaKnown RBP7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 PAX2Q02962 417 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 RHEBQ15382 184 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 HCP5Q6MZN7 132 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 LCN15Q6UWW0 184 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 ZNF114Q8NC26 417 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 OR10G9Q8NGN4 311 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 OR10G7Q8NGN6 311 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 COMMD5Q9GZQ3 224 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 ZNF430Q9H8G1 570 aaPredicted RBP7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 UBTD1Q9HAC8 227 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 SLC39A9Q9NUM3 307 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 ABCA2Q9BZC7 2435 aa7.3□□□□□ -1.24
LINCMD1-201ENST00000418518 RELNP78509 3460 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 CYB5BO43169 146 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 IGHV2-5P01817 119 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 GPX4P36969 197 aaPredicted RBP7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 PRR20EP86478 221 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 PRR20CP86479 221 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 PRR20DP86480 221 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 PRR20BP86481 221 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 PRR20AP86496 221 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 PRSS8Q16651 343 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 HAGHQ16775 308 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 SOHLH1Q5JUK2 328 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 TPTE2P1Q5T6R2 138 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 FAM90A2PQ658T7 463 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 TEPPQ6URK8 271 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 TMEM144Q7Z5S9 345 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 MMD2Q8IY49 270 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 CACNG8Q8WXS5 425 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 RAB24Q969Q5 203 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 SLC25A22Q9H936 323 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 MANBALQ9NQG1 85 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 ONECUT1Q9UBC0 465 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 VAX2Q9UIW0 290 aa7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 TMA7Q9Y2S6 64 aaKnown RBP7.29□□□□□ -1.24
LINCMD1-201ENST00000418518 CACNA1BQ00975 2339 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 AKAP6Q13023 2319 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 OOSP1A8MZH6 123 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 ENSAO43768 121 aaKnown RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 SLC25A17O43808 307 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 CDKN1AP38936 164 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 CDC34P49427 236 aaPredicted RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 FGF8P55075 233 aaPredicted RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 ERHP84090 104 aaKnown RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 CD69Q07108 199 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 PSG5Q15238 335 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 AWAT1Q58HT5 328 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 LDLRAD2Q5SZI1 272 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 RBMS3Q6XE24 437 aaKnown RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 MRPL41Q8IXM3 137 aaKnown RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 PNKDQ8N490 385 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 CYB561D1Q8N8Q1 229 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 RNASEH2CQ8TDP1 164 aaKnown RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 RXFP4Q8TDU9 374 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 CFHR4Q92496 578 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 RPEQ96AT9 228 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 TUBA4BQ9H853 241 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 GNG13Q9P2W3 67 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 SLC45A2Q9UMX9 530 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 POLR3KQ9Y2Y1 108 aaPredicted RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 SIGLEC9Q9Y336 463 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 KLF2Q9Y5W3 355 aaPredicted RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 PXMP4Q9Y6I8 212 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 USP9XQ93008 2570 aaPredicted RBP7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 DCHS2Q6V1P9 2916 aa7.28□□□□□ -1.24
LINCMD1-201ENST00000418518 A0A087WWC5 75 aa7.27□□□□□ -1.25
LINCMD1-201ENST00000418518 IGLC7A0M8Q6 106 aa7.27□□□□□ -1.25
LINCMD1-201ENST00000418518 SMCO3A2RU48 225 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms