RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 M0R1X1 148 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 NPFFO15130 113 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 CIDEAO60543 219 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 PGLYRP1O75594 196 aaPredicted RBP4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 DHFRP00374 187 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 IGLV2-11P01706 119 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 IGHV1-69P01742 117 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 OR4E1P0C645 316 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 HTR1DP28221 377 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 CEACAM3P40198 252 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 ZNF137PP52743 207 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 PIGPP57054 158 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 UBE2MP61081 183 aaKnown RBP4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 DHODHQ02127 395 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 EIF4EBP1Q13541 118 aaPredicted RBP4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 RPL39P5Q59GN2 51 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 TMEM128Q5BJH2 165 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 LDLRAD2Q5SZI1 272 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 MINOS1Q5TGZ0 78 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 GPR157Q5UAW9 335 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 ZNF833PQ6ZTB9 187 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 KCTD9Q7L273 389 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 STPG4Q8N801 248 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 CCDC71LQ8N9Z2 235 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 OCC1Q8TAD7 63 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 RTN4IP1Q8WWV3 396 aaPredicted RBP4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 ST6GALNAC6Q969X2 333 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 TMEM230Q96A57 120 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 HSD17B10Q99714 261 aaKnown RBP4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 ZNF251Q9BRH9 671 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 BEX2Q9BXY8 128 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 NAA60Q9H7X0 242 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 Q9H8V8 135 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 BEX1Q9HBH7 125 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 SLC2A9Q9NRM0 540 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 DPM3Q9P2X0 92 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 TBL2Q9Y4P3 447 aaKnown RBP4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 MINOS1-NBL1R4GNA1 71 aa4.66□□□□□ -1.66
NIFKP3-201ENST00000417799 FLNAP21333 2647 aaKnown RBP4.65□□□□□ -1.66
NIFKP3-201ENST00000417799 ACANP16112 2415 aa4.65□□□□□ -1.66
NIFKP3-201ENST00000417799 TRAV40A0A0B4J280 105 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 CYSRT1A8MQ03 144 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 RNF212BA8MTL3 300 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 OOSP1A8MZH6 123 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 TNFSF12O43508 249 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 PRAF2O60831 178 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 B3GALNT1O75752 331 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 SFT2D2O95562 160 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 GAPDHP04406 335 aaKnown RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 IL5P05113 134 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 PRSS1P07477 247 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 CT45A6P0DMU7 189 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 CT45A5P0DMU8 189 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 CT45A7P0DMV0 189 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 CD99P14209 185 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 F2RP25116 425 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 DUTP33316 252 aaKnown RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 BPIFB3P59826 476 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 RPL30P62888 115 aaKnown RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 SUPT4H1P63272 117 aaKnown RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 ZNF816Q0VGE8 651 aaPredicted RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 CATR1Q13166 79 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 DHRS2Q13268 280 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 PPP1R1AQ13522 171 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 DIAPH2-AS1Q14236 149 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 KLF17Q5JT82 389 aaPredicted RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 TPTE2P1Q5T6R2 138 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 C11orf88Q6PI97 169 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 RBMS3Q6XE24 437 aaKnown RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 BRD3OSQ6XYD6 125 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 LHFPL4Q7Z7J7 247 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 TRPT1Q86TN4 253 aaKnown RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 TGIF2LXQ8IUE1 241 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 SGPP2Q8IWX5 399 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 MMD2Q8IY49 270 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 TEX29Q8N6K0 151 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 ZNF383Q8NA42 475 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 DRAXINQ8NBI3 349 aaPredicted RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 OR51H1Q8NH63 302 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 NANPQ8TBE9 248 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 C17orf50Q8WW18 174 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 TCTEX1D2Q8WW35 142 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 CAPSLQ8WWF8 208 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 RPEQ96AT9 228 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 MALSU1Q96EH3 234 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 GALNT14Q96FL9 552 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 ADTRPQ96IZ2 230 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 MRPL20Q9BYC9 149 aaKnown RBP4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 YAE1D1Q9NRH1 226 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 GSN-AS1Q9NRJ2 163 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 KCNIP3Q9Y2W7 256 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 HILPDAQ9Y5L2 63 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 VPS13CQ709C8 3753 aa4.65□□□□□ -1.67
NIFKP3-201ENST00000417799 IGHV1-3A0A0C4DH29 117 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 C3orf85A0A1B0GTC6 90 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 C9orf170A2RU37 121 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 SNRPGP15A8MWD9 76 aa4.64□□□□□ -1.67
NIFKP3-201ENST00000417799 H0YJW9 148 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms