RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 VSIRQ9H7M9 311 aa11.12□□□□□ -0.63
SNHG17-202ENST00000414142 PLEKHA3Q9HB20 300 aa11.12□□□□□ -0.63
SNHG17-202ENST00000414142 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
SNHG17-202ENST00000414142 IGSF10Q6WRI0 2623 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 LOC105371242A0A075B767 164 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 TEX50A0A1B0GTY4 177 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 SMCO3A2RU48 225 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 H3BQ15 152 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 EFNA4P52798 201 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 LCN15Q6UWW0 184 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 PNKDQ8N490 385 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 ZNF709Q8N972 641 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 SLC39A9Q9NUM3 307 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 IGHV3-72A0A0B4J1Y9 119 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 BUB1B-PAK6H3BSN5 160 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 IFNA1P01562 189 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 NPY1RP25929 384 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 CD1BP29016 333 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 ARF6P62330 175 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 PRCDQ00LT1 54 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 BEND2Q8NDZ0 799 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 SLC24A4Q8NFF2 622 aa11.11□□□□□ -0.63
SNHG17-202ENST00000414142 CA2P00918 260 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 BCL2P10415 239 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 MOB3BQ86TA1 216 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 CYB561D1Q8N8Q1 229 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 HIST1H2BAQ96A08 127 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 P2RX4Q99571 388 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 NIPSNAP3BQ9BS92 247 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 BIN3Q9NQY0 253 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 AMMECR1Q9Y4X0 333 aaPredicted RBP11.1□□□□□ -0.63
SNHG17-202ENST00000414142 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
SNHG17-202ENST00000414142 MAP1LC3B2A6NCE7 125 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 C17orf112F2Z3M2 114 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 USF1P22415 310 aaPredicted RBP11.09□□□□□ -0.63
SNHG17-202ENST00000414142 CEBPGP53567 150 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 RPL8P62917 257 aaKnown RBP11.09□□□□□ -0.63
SNHG17-202ENST00000414142 RBMS3Q6XE24 437 aaKnown RBP11.09□□□□□ -0.63
SNHG17-202ENST00000414142 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 OR5B3Q8NH48 314 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 VSTM2AQ8TAG5 236 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 TMEM170AQ8WVE7 144 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 TVP23CQ96ET8 276 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 GGACTQ9BVM4 153 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 MAP1LC3BQ9GZQ8 125 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 SIRT7Q9NRC8 400 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 SOX15O60248 233 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 PRB1P04280 392 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 MDKP21741 143 aaPredicted RBP11.09□□□□□ -0.63
SNHG17-202ENST00000414142 RAB5BP61020 215 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 RPP25LQ8N5L8 163 aaKnown RBP11.09□□□□□ -0.63
SNHG17-202ENST00000414142 Q8N7P7 452 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 TMEM167AQ8TBQ9 72 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 RPEQ96AT9 228 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 VAX2Q9UIW0 290 aa11.09□□□□□ -0.63
SNHG17-202ENST00000414142 DCHS2Q6V1P9 2916 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 A0A087WWC5 75 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 ZFP92A6NM28 416 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 C1orf196B1AJZ1 125 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 IGLV2-23P01705 113 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 FBP1P09467 338 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 DLK1P80370 383 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 FFAR4Q5NUL3 377 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 ACSM6Q6P461 480 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 OR4P4Q8NGL7 312 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 RITA1Q96K30 269 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 C12orf57Q99622 126 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 SAV1Q9H4B6 383 aaPredicted RBP11.08□□□□□ -0.64
SNHG17-202ENST00000414142 WDR83OSQ9Y284 106 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 IGHV1-3A0A0C4DH29 117 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 M0R1W7 72 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 SLC25A17O43808 307 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 MAS1LP35410 378 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 TAGLN2P37802 199 aaKnown RBP11.08□□□□□ -0.64
SNHG17-202ENST00000414142 LGALS7P47929 136 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
SNHG17-202ENST00000414142 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 OR10G9Q8NGN4 311 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 OR10G7Q8NGN6 311 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 ACTR3CQ9C0K3 210 aaPredicted RBP11.08□□□□□ -0.64
SNHG17-202ENST00000414142 AKAP6Q13023 2319 aa11.08□□□□□ -0.64
SNHG17-202ENST00000414142 CTXND1A0A1B0GTU2 59 aa11.07□□□□□ -0.64
SNHG17-202ENST00000414142 B4DEV8 164 aa11.07□□□□□ -0.64
SNHG17-202ENST00000414142 OR2C1O95371 312 aa11.07□□□□□ -0.64
SNHG17-202ENST00000414142 OR10W1Q8NGF6 305 aa11.07□□□□□ -0.64
SNHG17-202ENST00000414142 ISOC2Q96AB3 205 aa11.07□□□□□ -0.64
SNHG17-202ENST00000414142 CFAP46Q8IYW2 2715 aa11.07□□□□□ -0.64
SNHG17-202ENST00000414142 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
SNHG17-202ENST00000414142 CYB5BO43169 146 aa11.06□□□□□ -0.64
SNHG17-202ENST00000414142 MPDU1O75352 247 aa11.06□□□□□ -0.64
SNHG17-202ENST00000414142 IGKV1D-33P01593 117 aa11.06□□□□□ -0.64
SNHG17-202ENST00000414142 IGKV1-33P01594 117 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms