RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ZCCHC24Q8N2G6 241 aaKnown RBP7.16□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF645Q8N7E2 425 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 MAP1LC3AQ9H492 121 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 CACNG5Q9UF02 275 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 FBXL17Q9UF56 701 aa7.16□□□□□ -1.26
SYNE1-211ENST00000413186 USF3Q68DE3 2245 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 ANKHD1Q8IWZ3 2542 aaKnown RBP7.15□□□□□ -1.26
SYNE1-211ENST00000413186 HPRT1P00492 218 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 FBP1P09467 338 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM258P61165 79 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 PAX5Q02548 391 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 EFNB3Q15768 340 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 MIDNQ504T8 468 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 KLF2Q9Y5W3 355 aaPredicted RBP7.15□□□□□ -1.26
SYNE1-211ENST00000413186 H3BTX0 84 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 FAM106CPP0CH98 169 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM50BP56557 158 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 ADAD2Q8NCV1 583 aaKnown RBP7.15□□□□□ -1.26
SYNE1-211ENST00000413186 OR2K2Q8NGT1 345 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF502Q8TBZ5 544 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 GNB4Q9HAV0 340 aa7.15□□□□□ -1.26
SYNE1-211ENST00000413186 TLN1Q9Y490 2541 aaKnown RBP7.15□□□□□ -1.26
SYNE1-211ENST00000413186 FRYLO94915 3013 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 KBTBD11-OT1A0A1B0GTJ5 212 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM178BH3BS89 294 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 CSN3P07498 182 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 MEOX2P50222 304 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 FBXL19-AS1Q494R0 122 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 DPPA3Q6W0C5 159 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 MAGT1Q9H0U3 335 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 C12orf77C9JDV5 145 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 SPINK4O60575 86 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 IAPPP10997 89 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 BPIFB3P59826 476 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 SNRPEP62304 92 aaKnown RBP7.15□□□□□ -1.27
SYNE1-211ENST00000413186 DERL1Q9BUN8 251 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 SEBOXQ9HB31 216 aaPredicted RBP7.15□□□□□ -1.27
SYNE1-211ENST00000413186 YAE1D1Q9NRH1 226 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 UQCC1Q9NVA1 299 aa7.15□□□□□ -1.27
SYNE1-211ENST00000413186 AKAP6Q13023 2319 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 A0A1B0GWB2 263 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 H0Y980 276 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 TRGC2P03986 189 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF787Q6DD87 383 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 PARP11Q9NR21 331 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM50AO95807 157 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 PPP1R17O96001 155 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 ATP5IP56385 69 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-211ENST00000413186 JOSD1Q15040 202 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-211ENST00000413186 SPNS3Q6ZMD2 512 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-211ENST00000413186 AQP10Q96PS8 301 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 NAT8BQ9UHF3 227 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 C5orf63A6NC05 138 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 HOXA3O43365 443 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-211ENST00000413186 ELLP55199 621 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-211ENST00000413186 ELOBQ15370 118 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 MMDQ15546 238 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 OR5AU1Q8NGC0 362 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 WDR87Q6ZQQ6 2873 aa7.14□□□□□ -1.27
SYNE1-211ENST00000413186 IGLV3-9A0A075B6K5 115 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 IGKV1-12A0A0C4DH73 117 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 A0A1W2PPE3 182 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 MLNRO43193 412 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 IGKV1D-12P01611 117 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 HLA-GP17693 338 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 IFITM2Q01629 132 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 EEF1AKMT3Q96AZ1 226 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 DPH3P1Q9H4G8 78 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 SIRT7Q9NRC8 400 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 TP53BP1Q12888 1972 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-211ENST00000413186 CEACAM18A8MTB9 384 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 CXCL2P19875 107 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 SSTR5P35346 364 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 GATA4P43694 442 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 TNXAQ16473 311 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 FAM166AQ6J272 317 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 ATOH7Q8N100 152 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 PNKDQ8N490 385 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 OR10A7Q8NGE5 316 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 OR5C1Q8NGR4 320 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 OR1L8Q8NGR8 309 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 OR1P1Q8NH06 330 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 FAM90A26D6RGX4 464 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 SLC25A16P16260 332 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 HINT1P49773 126 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-211ENST00000413186 GCSAMLQ5JQS6 135 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 PCSK4Q6UW60 755 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 SEM1Q6ZVN7 128 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF114Q8NC26 417 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 MRPL30Q8TCC3 161 aaKnown RBP7.13□□□□□ -1.27
SYNE1-211ENST00000413186 TBX15Q96SF7 602 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 ATP5SQ99766 215 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM147Q9BVK8 224 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM222Q9H0R3 208 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 DPM3Q9P2X0 92 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 IGKV1-27A0A075B6S5 117 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 BTCP35070 178 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms