RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 GGTLC1Q9BX51 225 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 DEFB127Q9H1M4 99 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 NCOR1P1Q9H4R4 102 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 CRIM1Q9NZV1 1036 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 ASXL3Q9C0F0 2248 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 IGHV2OR16-5A0A0B4J2B6 119 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 GAGE12BA1L429 117 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 MLNRO43193 412 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 TREML4Q6UXN2 200 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 MDP1Q86V88 176 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 OR1B1Q8NGR6 318 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 FNDC4Q9H6D8 234 aaPredicted RBP11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 MRPL27Q9P0M9 148 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-201ENST00000412649 ZNF83P51522 516 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 OR2Z1Q8NG97 314 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 EPHA8P29322 1005 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 TNXAQ16473 311 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 ZNF585BQ52M93 769 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 FBXW9Q5XUX1 488 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 ZNF497Q6ZNH5 498 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 FGFBP3Q8TAT2 258 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 FZR1Q9UM11 496 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 KIAA2026Q5HYC2 2103 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 CA1P00915 261 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 SSTR5P35346 364 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 MAP1BP46821 2468 aaKnown RBP11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 NOTCH4Q99466 2003 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 H3BUT2 72 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 LAMTOR5O43504 91 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 TMEM177Q53S58 311 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 FOXL2NBQ6ZUU3 175 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 GUCD1Q96NT3 240 aa11.64□□□□□ -0.55
CLTCL1-201ENST00000412649 TIAF1O95411 115 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 LHX2P50458 406 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 SLC35E4Q6ICL7 350 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 Q6ZVH6 145 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 HIGD1CA8MV81 97 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 VSTM5A8MXK1 200 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 LRRC10Q5BKY1 277 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 ZNF826PQ6ZT77 177 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 OR10AG1Q8NH19 301 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 PERPQ96FX8 193 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 C11orf1Q9H5F2 150 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 TRBV6-6A0A0A6YYG2 114 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 C2CD4DB7Z1M9 353 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 MT-CO3P00414 261 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 SPCS1Q9Y6A9 102 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 IGHV5-10-1A0A0J9YXX1 117 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 A1L4Q6 167 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 IGKV1D-39P04432 117 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 C20orf204Q6ZNR8 217 aa11.63□□□□□ -0.55
CLTCL1-201ENST00000412649 IGHV1-45A0A0A0MS14 117 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 ANOS1P23352 680 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 RSPO1Q2MKA7 263 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 Q5PR19 223 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 OR10X1Q8NGY0 326 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 SGK494Q96LW2 274 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 MRPL32Q9BYC8 188 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 SLC25A10Q9UBX3 287 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 MUC21A0A0G2JKD1 596 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 MUC21A0A140T8X8 626 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 F2Z2F3 143 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 GCSHP23434 173 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 SPINK14Q6IE38 97 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 C6orf15Q6UXA7 325 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 TMEM144Q7Z5S9 345 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 KLF13Q9Y2Y9 288 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 PGPA6NDG6 321 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 PRSS1P07477 247 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 PTGDSP41222 190 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 PCOLCEQ15113 449 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 ALKBH6Q3KRA9 238 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 JKAMPQ9P055 326 aa11.62□□□□□ -0.55
CLTCL1-201ENST00000412649 IGHV2-26A0A0B4J1V2 119 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 ETV2O00321 342 aaPredicted RBP11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 IGLV3-12A0A075B6K2 115 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 SEC11AP67812 179 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 NRN1LQ496H8 165 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 SPATA31B1PQ5VZV4 182 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 SEPSECSQ9HD40 501 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 LYZL6O75951 148 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 HS3ST6Q96QI5 342 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 MGST2Q99735 147 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 LOC389332A0A1B0GUA5 103 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 hDV102S1A0JD36 115 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 OR2T8A6NH00 312 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 GNG7O60262 68 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 PLAUP00749 431 aa11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 PHF7Q9BWX1 381 aaPredicted RBP11.61□□□□□ -0.55
CLTCL1-201ENST00000412649 NPIPB11E5RHQ5 1161 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms