RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 EGR1P18146 543 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 OR11H1Q8NG94 326 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 OR11H2Q8NH07 326 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 C2orf88Q9BSF0 95 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 TMEM160Q9NX00 188 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 GRIFINA4D1Z8 144 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 PROB1E7EW31 1015 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 PMCHL2Q9BQD1 86 aa15.48■□□□□ 0.07
HCG11-201ENST00000411553 BEX4Q9NWD9 120 aaPredicted RBP15.48■□□□□ 0.07
HCG11-201ENST00000411553 ADAMTS7Q9UKP4 1686 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 REPIN1Q9BWE0 567 aaKnown RBP15.47■□□□□ 0.07
HCG11-201ENST00000411553 ZNF98A6NK75 572 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 CGAP01215 116 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 NPFFR1Q9GZQ6 430 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 CCDC88CQ9P219 2028 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 VENTXO95231 258 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 HTN3P15516 51 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 MRPL14Q6P1L8 145 aaKnown RBP15.47■□□□□ 0.07
HCG11-201ENST00000411553 REC114Q7Z4M0 266 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 PRELID3AQ96N28 172 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 OR52E5Q8NH55 327 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 MARVELD3Q96A59 401 aa15.47■□□□□ 0.07
HCG11-201ENST00000411553 COLCA1Q6ZS62 124 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 IGHV3-11P01762 117 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 SOD3P08294 240 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 TMEM105Q8N8V8 129 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 RNASEH2CQ8TDP1 164 aaKnown RBP15.46■□□□□ 0.07
HCG11-201ENST00000411553 TGFBR3LH3BV60 316 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 CELA3BP08861 270 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 RCC1LQ96I51 464 aaKnown RBP15.46■□□□□ 0.07
HCG11-201ENST00000411553 ZNF414Q96IQ9 312 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 WNT10AQ9GZT5 417 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 CBLN4Q9NTU7 201 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 PEX7O00628 323 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 RNASE4P34096 147 aaKnown RBP15.46■□□□□ 0.07
HCG11-201ENST00000411553 LTBRP36941 435 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 CDX1P47902 265 aaPredicted RBP15.46■□□□□ 0.07
HCG11-201ENST00000411553 JMJD8Q96S16 334 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 RPRMQ9NS64 109 aa15.46■□□□□ 0.07
HCG11-201ENST00000411553 SCN4AP35499 1836 aa15.46■□□□□ 0.06
HCG11-201ENST00000411553 UMODP07911 640 aa15.46■□□□□ 0.06
HCG11-201ENST00000411553 VDAC2P45880 294 aaPredicted RBP15.46■□□□□ 0.06
HCG11-201ENST00000411553 EMP1P54849 157 aa15.46■□□□□ 0.06
HCG11-201ENST00000411553 ZNF506Q5JVG8 444 aa15.46■□□□□ 0.06
HCG11-201ENST00000411553 SAMD13Q5VXD3 122 aa15.46■□□□□ 0.06
HCG11-201ENST00000411553 FMC1Q96HJ9 113 aa15.46■□□□□ 0.06
HCG11-201ENST00000411553 TRGV2A0A075B6R0 118 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 SDF2L1Q9HCN8 221 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 PAX1P15863 534 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 TFF3Q07654 80 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 IGHV3OR16-8A0A075B7F1 116 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 CSRP1P21291 193 aaKnown RBP15.45■□□□□ 0.06
HCG11-201ENST00000411553 ATAD5Q96QE3 1844 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 MSGN1A6NI15 193 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 UCP1P25874 307 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 CACNG8Q8WXS5 425 aa15.45■□□□□ 0.06
HCG11-201ENST00000411553 COL11A2P13942 1736 aaPredicted RBP15.45■□□□□ 0.06
HCG11-201ENST00000411553 SPTA1P02549 2419 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 CD8AP01732 235 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 A0A0G2JK05 382 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 NBR2O15453 112 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 MYOD1P15172 320 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 FOXA3P55318 350 aaPredicted RBP15.44■□□□□ 0.06
HCG11-201ENST00000411553 CASP8AP2Q9UKL3 1982 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 COL5A3P25940 1745 aaPredicted RBP15.44■□□□□ 0.06
HCG11-201ENST00000411553 ANKRD31Q8N7Z5 1873 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 H3BRM9 83 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 KIF13BQ9NQT8 1826 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 CBLN1P23435 193 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 CACNG7P62955 275 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 TBR1Q16650 682 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 ATOH7Q8N100 152 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 OR11H4Q8NGC9 324 aa15.44■□□□□ 0.06
HCG11-201ENST00000411553 LHX2P50458 406 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 C18orf15Q96N68 181 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 PRSS22Q9GZN4 317 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 TDRD6O60522 2096 aaKnown RBP15.43■□□□□ 0.06
HCG11-201ENST00000411553 ARFGEF1Q9Y6D6 1849 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 TRAV8-6A0A0B4J262 113 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 SCGB3A1Q96QR1 104 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 ZNF837Q96EG3 531 aaPredicted RBP15.43■□□□□ 0.06
HCG11-201ENST00000411553 VWCEQ96DN2 955 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 KCNS1Q96KK3 526 aa15.43■□□□□ 0.06
HCG11-201ENST00000411553 WFIKKN1Q96NZ8 548 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 A0A1B0GUT8 65 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 TMEM183AQ8IXX5 376 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 PQLC2LA1A4F0 135 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 ATP5LO75964 103 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 CCL3L1P16619 93 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 CSRP3P50461 194 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 Q5BKY6 102 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 DMRTA2Q96SC8 542 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 NHLRC3Q5JS37 347 aa15.42■□□□□ 0.06
HCG11-201ENST00000411553 CIARTQ8N365 385 aaPredicted RBP15.42■□□□□ 0.06
HCG11-201ENST00000411553 IL36BQ9NZH7 164 aa15.41■□□□□ 0.06
HCG11-201ENST00000411553 RGPD3A6NKT7 1758 aaPredicted RBP15.41■□□□□ 0.06
HCG11-201ENST00000411553 STHQ8IWL8 128 aa15.41■□□□□ 0.06
HCG11-201ENST00000411553 LRTM2Q8N967 370 aa15.41■□□□□ 0.06
HCG11-201ENST00000411553 MUC21A0A0G2JKD1 596 aa15.41■□□□□ 0.06
HCG11-201ENST00000411553 MUC21A0A140T8X8 626 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms