RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ODF1Q14990 250 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 TPTE2P1Q5T6R2 138 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 ZNF787Q6DD87 383 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 ALKAL2Q6UX46 152 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 OR4A16Q8NH70 328 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 DPF1Q92782 380 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 LHX4Q969G2 390 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 FLYWCH2Q96CP2 140 aaKnown RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CIB3Q96Q77 187 aaPredicted RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 SIRT7Q9NRC8 400 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 MMP26Q9NRE1 261 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 PSENENQ9NZ42 101 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 ZNF257Q9Y2Q1 563 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 COL12A1Q99715 3063 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CR1P17927 2039 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 A0A096LNT2 108 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 PMS2P5A8MQ11 134 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 KBTBD11O94819 623 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 SAA1P0DJI8 122 aaPredicted RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 IAPPP10997 89 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 VDAC2P45880 294 aaPredicted RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 DVL1P1P54792 670 aaPredicted RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 OR2B8PP59922 312 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 RBX1P62877 108 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 KLRD1Q13241 179 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CLEC9AQ6UXN8 241 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 LRRC75A-AS1Q8N1F1 130 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 SVBPQ8N300 66 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CFHR4Q92496 578 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 ZDHHC16Q969W1 377 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 PERPQ96FX8 193 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 HARBI1Q96MB7 349 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 PSMG3-AS1Q96PY0 264 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 TBX15Q96SF7 602 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 GINS3Q9BRX5 216 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 SLC25A32Q9H2D1 315 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 PRNDQ9UKY0 176 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 RPH3ALQ9UNE2 315 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 INSIG2Q9Y5U4 225 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 UTP20O75691 2785 aaKnown RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 OOSP1A8MZH6 123 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM238C9JI98 176 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CRYGCP07315 174 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CRYGBP07316 175 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 NMBP08949 121 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 SLC25A16P16260 332 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 HIST1H1BP16401 226 aaKnown RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 HTR1DP28221 377 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 CD1BP29016 333 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 PRB3Q04118 309 aaPredicted RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 PAX8Q06710 450 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 MRGPRG-AS1Q2M3A8 158 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 MINOS1Q5TGZ0 78 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 THNSL2Q86YJ6 484 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 VSTM2AQ8TAG5 236 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM167AQ8TBQ9 72 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 RPEQ96AT9 228 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 OR4C12Q96R67 309 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 MS4A7Q9GZW8 240 aaPredicted RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 BEX4Q9NWD9 120 aaPredicted RBP4.45□□□□□ -1.7
EPHA4-202ENST00000409854 DPM3Q9P2X0 92 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 MINOS1-NBL1R4GNA1 71 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 FBN2P35556 2912 aa4.45□□□□□ -1.7
EPHA4-202ENST00000409854 C1orf196B1AJZ1 125 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 INS-IGF2F8WCM5 200 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 K7EP13 123 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 FGF16O43320 207 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 COL8A1P27658 744 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 CEACAM3P40198 252 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 LGALS7P47929 136 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 DYNLT3P51808 116 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 KRTAP10-9P60411 292 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 HSPE1P61604 102 aaKnown RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 OR5C1Q8NGR4 320 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 RBMXL1Q96E39 390 aaKnown RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 RNF5Q99942 180 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 PARD6GQ9BYG4 376 aaPredicted RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 SMIM3Q9BZL3 60 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 TCF19Q9Y242 345 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 TBL2Q9Y4P3 447 aaKnown RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 BORCS7-ASMTA0A0B4J1R7 106 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 H3BP45 60 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 CST7O76096 145 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 TOX4O94842 621 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 USF1P22415 310 aaPredicted RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 UBE2E1P51965 193 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 PRCDQ00LT1 54 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 ARL16Q0P5N6 197 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM267Q0VDI3 215 aaPredicted RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 ZNF266Q14584 549 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 OR1S2Q8NGQ3 325 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 OR5B3Q8NH48 314 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 MBD6Q96DN6 1003 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 AJUBAQ96IF1 538 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 ATP5SQ99766 215 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 FKBP11Q9NYL4 201 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 MYO18BQ8IUG5 2567 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 C15orf62A8K5M9 175 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 CEBPZOSA8MTT3 80 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms