RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 NANOS1Q8WY41 292 aaKnown RBP10.82□□□□□ -0.68
PTPRN-202ENST00000409251 FOXH1O75593 365 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 NUDT3O95989 172 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 CD1BP29016 333 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 GNG4P50150 75 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 FGF12P61328 243 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 RBX1P62877 108 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 PSG5Q15238 335 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 GABRA6Q16445 453 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF585BQ52M93 769 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 WFDC8Q8IUA0 241 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.82□□□□□ -0.68
PTPRN-202ENST00000409251 ZFYVE26Q68DK2 2539 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 CGAP01215 116 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 RPL30P62888 115 aaKnown RBP10.81□□□□□ -0.68
PTPRN-202ENST00000409251 MPV17L2Q567V2 206 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 PCSK4Q6UW60 755 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 ASCL5Q7RTU5 278 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 LHFPL4Q7Z7J7 247 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF331Q9NQX6 463 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-202ENST00000409251 PPOXP50336 477 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 PDLIM4P50479 330 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 PLP2Q04941 152 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 OR8B8Q15620 311 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF826PQ6ZT77 177 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 RPRMLQ8N4K4 120 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 KLHDC1Q8N7A1 406 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 C20orf144Q9BQM9 153 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 DCTN5Q9BTE1 182 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 DYSFO75923 2080 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 SPG11Q96JI7 2443 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 PLXNB1O43157 2135 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 WNT2P09544 360 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF137PP52743 207 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 GAGE1Q13065 139 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 C1orf174Q8IYL3 243 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 OR2D3Q8NGH3 330 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 OR2T6Q8NHC8 308 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 BCL2L2Q92843 193 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-202ENST00000409251 SPOCK3Q9BQ16 436 aa10.81□□□□□ -0.68
PTPRN-202ENST00000409251 COL5A1P20908 1838 aaPredicted RBP10.8□□□□□ -0.68
PTPRN-202ENST00000409251 TRAV24A0A0B4J272 114 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 NPIPB13A6NJU9 1138 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF891A8MT65 544 aaPredicted RBP10.8□□□□□ -0.68
PTPRN-202ENST00000409251 NPIPB4C9JG80 1138 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 MFAP2P55001 183 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 GNG12Q9UBI6 72 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 OR2T8A6NH00 312 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 PDE6DO43924 150 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 GPX1P07203 203 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 CD99P14209 185 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 USF1P22415 310 aaPredicted RBP10.8□□□□□ -0.68
PTPRN-202ENST00000409251 CRYGSP22914 178 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 FKBP2P26885 142 aaKnown RBP10.8□□□□□ -0.68
PTPRN-202ENST00000409251 FBXW9Q5XUX1 488 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 TEX43Q6ZNM6 134 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 TMEM178AQ8NBL3 297 aa10.8□□□□□ -0.68
PTPRN-202ENST00000409251 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 FOXF2Q12947 444 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 TIGITQ495A1 244 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 C10orf128Q5T292 105 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF324BQ6AW86 544 aaPredicted RBP10.79□□□□□ -0.68
PTPRN-202ENST00000409251 AMMECR1LQ6DCA0 310 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 VWA1Q6PCB0 445 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 OR4A16Q8NH70 328 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 OR8B2Q96RD0 313 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
PTPRN-202ENST00000409251 RPL8P62917 257 aaKnown RBP10.79□□□□□ -0.68
PTPRN-202ENST00000409251 LEAP2Q969E1 77 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 HSD17B10Q99714 261 aaKnown RBP10.79□□□□□ -0.68
PTPRN-202ENST00000409251 SEPSECSQ9HD40 501 aaKnown RBP10.79□□□□□ -0.68
PTPRN-202ENST00000409251 PLSCR2Q9NRY7 297 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 CACNA1AO00555 2505 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 A0A1W2PN81 502 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 TSPOP30536 169 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 FABP6P51161 128 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 CENPWQ5EE01 88 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 AP1S3Q96PC3 154 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 SF3B5Q9BWJ5 86 aaKnown RBP10.79□□□□□ -0.68
PTPRN-202ENST00000409251 OBP2BQ9NPH6 170 aa10.79□□□□□ -0.68
PTPRN-202ENST00000409251 YTHDF2Q9Y5A9 579 aaKnown RBP10.79□□□□□ -0.68
PTPRN-202ENST00000409251 hDV102S1A0JD36 115 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 PLAUP00749 431 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 SSTR5P35346 364 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 ZNF83P51522 516 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 LINC00310P59036 64 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 PCBD1P61457 104 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 RPL19P84098 196 aaKnown RBP10.78□□□□□ -0.68
PTPRN-202ENST00000409251 SSX8Q7RTT4 187 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 GMPPAQ96IJ6 420 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-202ENST00000409251 LINC00479Q96M42 142 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 TPPP3Q9BW30 176 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 CLEC7AQ9BXN2 247 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 NKX6-3A6NJ46 265 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 WNT9BO14905 357 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 VENTXO95231 258 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 TNFSF4P23510 183 aa10.78□□□□□ -0.68
PTPRN-202ENST00000409251 CA7P43166 264 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms