RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ELLP55199 621 aaPredicted RBP6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 CD81P60033 236 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 MRPS10P82664 201 aaKnown RBP6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 SPSB3Q6PJ21 355 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 GPR141Q7Z602 305 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 Q8N1Y9 231 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 ARRDC1Q8N5I2 433 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 ISOC1Q96CN7 298 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 BSCL2Q96G97 398 aaPredicted RBP6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 HINT2Q9BX68 163 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 ZC4H2Q9NQZ6 224 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 OR51B2Q9Y5P1 312 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 TRAV25A0A0B4J276 109 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 C15orf61A6NNL5 157 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 E7EUB6 86 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 HPGDSO60760 199 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 NOL3O60936 208 aaKnown RBP6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 B3GALNT1O75752 331 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 OR2C1O95371 312 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 KRASP01116 189 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 REG1AP05451 166 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 CLEC3BP05452 202 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 OR13C7P0DN81 318 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 ELK1P19419 428 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 DEFB114Q30KQ6 69 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 CD300EQ496F6 205 aaPredicted RBP6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 PHLDA2Q53GA4 152 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 ZNF57Q68EA5 555 aaPredicted RBP6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 SLC25A24Q6NUK1 477 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 PLET1Q6UQ28 207 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 H2BFWTQ7Z2G1 175 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 LYSMD2Q8IV50 215 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 CCDC71LQ8N9Z2 235 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 OR4A16Q8NH70 328 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 MUC7Q8TAX7 377 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 ZNF502Q8TBZ5 544 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 FCAMRQ8WWV6 532 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 BCL7BQ9BQE9 202 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 NEURL2Q9BR09 285 aa6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 F11RQ9Y624 299 aaKnown RBP6.89□□□□□ -1.31
SNORD88A-201ENST00000408314 TRAV3A0A0B4J244 114 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 TEX50A0A1B0GTY4 177 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 A0A1B0GW64 132 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 MFSD2BA6NFX1 497 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 TGOLN2O43493 480 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 PGAM2P15259 253 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 CBLN1P23435 193 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 GPR183P32249 361 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 G6PCP35575 357 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 TAS2R19P59542 299 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 RND3P61587 244 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 CTF1Q16619 201 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 GPR107Q5VW38 600 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 RBPMS2Q6ZRY4 209 aaKnown RBP6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 TBC1D26Q86UD7 250 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 ZFAND1Q8TCF1 268 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 CITED4Q96RK1 184 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 THAP7Q9BT49 309 aaPredicted RBP6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 PDCD10Q9BUL8 212 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 NDUFA4L2Q9NRX3 87 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 C21orf62Q9NYP8 219 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 MRPL27Q9P0M9 148 aaKnown RBP6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 EXTL2Q9UBQ6 330 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 MTFP1Q9UDX5 166 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 CEPT1Q9Y6K0 416 aa6.88□□□□□ -1.31
SNORD88A-201ENST00000408314 CGB1A6NKQ9 187 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 NDUFA4O00483 81 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 RGS5O15539 181 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 SCGB2A1O75556 95 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 IGHV3-23P01764 117 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 HLA-AP01891 365 aaKnown RBP6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 SMIM18P0DKX4 95 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 LYL1P12980 280 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 BMI1P35226 326 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 AKR1C2P52895 323 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 ERHP84090 104 aaKnown RBP6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 RELQ04864 619 aaPredicted RBP6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 MEF2DQ14814 521 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 ZNF585BQ52M93 769 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 LAMTOR1Q6IAA8 161 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 C19orf35Q6ZS72 473 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 UXS1Q8NBZ7 420 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 OR10W1Q8NGF6 305 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 OR52B4Q8NGK2 314 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 OR1P1Q8NH06 330 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 RAB2BQ8WUD1 216 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 TMEM190Q8WZ59 177 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 DAZ1Q9NQZ3 744 aaKnown RBP6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 TMEM14BQ9NUH8 114 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 COPZ2Q9P299 210 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 DMRT1Q9Y5R6 373 aa6.87□□□□□ -1.31
SNORD88A-201ENST00000408314 TMEM213A2RRL7 107 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms