RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PSG3Q16557 428 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 FAM69BQ5VUD6 431 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 SSX8Q7RTT4 187 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 OR52E5Q8NH55 327 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 PHF7Q9BWX1 381 aaPredicted RBP10.6□□□□□ -0.71
HERC3-203ENST00000407637 PLA2G2FQ9BZM2 168 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 PLSCR4Q9NRQ2 329 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 C1RLQ9NZP8 487 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 CFAP54Q96N23 3096 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 AGFG2O95081 481 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 LEPROTL1O95214 131 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 IGLV2-8P01709 118 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 EFNB3Q15768 340 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 BPIFA4PQ86YQ2 179 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 MKXQ8IYA7 352 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 TMEM251Q8N6I4 163 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 STXBP6Q8NFX7 210 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 PSG11Q9UQ72 335 aa10.6□□□□□ -0.71
HERC3-203ENST00000407637 CACNA1DQ01668 2161 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 TET2Q6N021 2002 aaPredicted RBP10.59□□□□□ -0.71
HERC3-203ENST00000407637 A0A0G2JLM5 398 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 SPAARA0A1B0GVQ0 90 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 H3BRM9 83 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 NEURL1O76050 574 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 SMIM17P0DL12 118 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 CAMPP49913 170 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 CRYBA4P53673 196 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 KRTAP27-1Q3LI81 207 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 WIPF2Q8TF74 440 aaPredicted RBP10.59□□□□□ -0.71
HERC3-203ENST00000407637 RAB37Q96AX2 223 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 C5orf30Q96GV9 206 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 DLL3Q9NYJ7 618 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 SSUH2Q9Y2M2 353 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 C17orf98A8MV24 154 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 F2RL2O00254 374 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 MPDU1O75352 247 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 NTF4P34130 210 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 HSD52Q0P140 79 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 BHLHA15Q7RTS1 189 aaPredicted RBP10.59□□□□□ -0.71
HERC3-203ENST00000407637 H2BFWTQ7Z2G1 175 aa10.59□□□□□ -0.71
HERC3-203ENST00000407637 CKS1BP61024 79 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 FAM53AQ6NSI3 398 aaPredicted RBP10.58□□□□□ -0.72
HERC3-203ENST00000407637 OR1L3Q8NH93 324 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 SPCS1Q9Y6A9 102 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
HERC3-203ENST00000407637 A0A0G2JMM0 328 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 A0A1W2PPB8 328 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 KIR3DP1A8MWS1 328 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 C21orf140B9A014 251 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 ACTL6BO94805 426 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 COX8AP10176 69 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 AREGP15514 252 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 CD24P25063 80 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 MC5RP33032 325 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 FABP6P51161 128 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 FOXA3P55318 350 aaPredicted RBP10.58□□□□□ -0.72
HERC3-203ENST00000407637 RAB31Q13636 194 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 RAB30Q15771 203 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 RNF138Q8WVD3 245 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 OR2H1Q9GZK4 316 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 GCM1Q9NP62 436 aa10.58□□□□□ -0.72
HERC3-203ENST00000407637 TSSC4Q9Y5U2 329 aaPredicted RBP10.58□□□□□ -0.72
HERC3-203ENST00000407637 P04436 131 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 BRWD1-AS2P59051 145 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 PSG5Q15238 335 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 YAF2Q8IY57 180 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 SPEM1Q8N4L4 309 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 NUP35Q8NFH5 326 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 ZNF48Q96MX3 618 aaPredicted RBP10.57□□□□□ -0.72
HERC3-203ENST00000407637 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 ZNF355PQ9NSJ1 428 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 TRAPPC2LQ9UL33 140 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 TNRC6BQ9UPQ9 1833 aaKnown RBP10.57□□□□□ -0.72
HERC3-203ENST00000407637 TNRC6AQ8NDV7 1962 aaKnown RBP10.57□□□□□ -0.72
HERC3-203ENST00000407637 IGLV3-32A0A0A0MS00 114 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 PSMB11A5LHX3 300 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
HERC3-203ENST00000407637 OR2J3O76001 311 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 SDK2Q58EX2 2172 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.57□□□□□ -0.72
HERC3-203ENST00000407637 ZNF788Q6ZQV5 615 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 MIR17HGQ75NE6 70 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 C7orf61Q8IZ16 206 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 IGF2BP2-AS1Q96M15 143 aa10.57□□□□□ -0.72
HERC3-203ENST00000407637 A6NDN8 102 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 LINC00205P59089 165 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 CCDC144NLQ6NUI1 221 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 RASL11AQ6T310 242 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 TIMM8BQ9Y5J9 83 aaPredicted RBP10.56□□□□□ -0.72
HERC3-203ENST00000407637 CHD9Q3L8U1 2897 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 A0A1W2PRE2 83 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 GGTLC3B5MD39 225 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 CCNOP22674 350 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 WIPI1Q5MNZ9 446 aaPredicted RBP10.56□□□□□ -0.72
HERC3-203ENST00000407637 ZNF645Q8N7E2 425 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 TPRX1Q8N7U7 411 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 OR5A1Q8NGJ0 315 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 VSTM2AQ8TAG5 236 aa10.56□□□□□ -0.72
HERC3-203ENST00000407637 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms