RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 MOB3BQ86TA1 216 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 RCC1LQ96I51 464 aaKnown RBP13.11□□□□□ -0.31
PARVB-203ENST00000404989 ACTR3CQ9C0K3 210 aaPredicted RBP13.11□□□□□ -0.31
PARVB-203ENST00000404989 NDUFA4L2Q9NRX3 87 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 USP24Q9UPU5 2620 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 CTXND1A0A1B0GTU2 59 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 A0A1B0GV50 99 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 CYB5BO43169 146 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 HTR1DP28221 377 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 MAS1LP35410 378 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 OPRK1P41145 380 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 PPT1P50897 306 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 MRGPRG-AS1Q2M3A8 158 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 ZNF506Q5JVG8 444 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 MMD2Q8IY49 270 aa13.11□□□□□ -0.31
PARVB-203ENST00000404989 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 IGHV2-5P01817 119 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 OPN1MWP04001 364 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 HSPB1P04792 205 aaKnown RBP13.1□□□□□ -0.31
PARVB-203ENST00000404989 OPN1MW2P0DN77 364 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 OPN1MW3P0DN78 364 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 TAGLN2P37802 199 aaKnown RBP13.1□□□□□ -0.31
PARVB-203ENST00000404989 SUB1P53999 127 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■■■■ 47.3
PARVB-203ENST00000404989 BTN1A1Q13410 526 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 BSXQ3C1V8 233 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 OR10G4Q8NGN3 311 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 OR10G9Q8NGN4 311 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 OR10G7Q8NGN6 311 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 SPOCK3Q9BQ16 436 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 DPM3Q9P2X0 92 aa13.1□□□□□ -0.31
PARVB-203ENST00000404989 CFAP46Q8IYW2 2715 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 TNCP24821 2201 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 MAP1LC3B2A6NCE7 125 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 PDLIM4P50479 330 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 PAX2Q02962 417 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 ZNF726P1Q15940 193 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 TPTE2P1Q5T6R2 138 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 ACSM6Q6P461 480 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 CLDND2Q8NHS1 167 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 MAP1LC3BQ9GZQ8 125 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 SIRT7Q9NRC8 400 aa13.09□□□□□ -0.31
PARVB-203ENST00000404989 CGB1A6NKQ9 187 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 E7EUB6 86 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 CRYGBP07316 175 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 LMO4P61968 165 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 GUCA2BQ16661 112 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 TEPPQ6URK8 271 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
PARVB-203ENST00000404989 RBMS3Q6XE24 437 aaKnown RBP13.08□□□□□ -0.32
PARVB-203ENST00000404989 ZNF430Q9H8G1 570 aaPredicted RBP13.08□□□□□ -0.32
PARVB-203ENST00000404989 OOSP1A8MZH6 123 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 SLC25A17O43808 307 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 ACTL6BO94805 426 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 IGKV1D-33P01593 117 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 IGKV1-33P01594 117 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 RNASE2P10153 161 aaKnown RBP13.07□□□□□ -0.32
PARVB-203ENST00000404989 GPX4P36969 197 aaPredicted RBP13.07□□□□□ -0.32
PARVB-203ENST00000404989 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
PARVB-203ENST00000404989 KLRD1Q13241 179 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 HNF4GQ14541 408 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 SSX7Q7RTT5 188 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 RPP25LQ8N5L8 163 aaKnown RBP13.07□□□□□ -0.32
PARVB-203ENST00000404989 CACNG8Q8WXS5 425 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 C1orf159Q96HA4 380 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 LSM4Q9Y4Z0 139 aaKnown RBP13.07□□□□□ -0.32
PARVB-203ENST00000404989 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 A0A1W2PPI3 338 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 ODF3BA8MYP8 253 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 NDUFS6O75380 124 aaKnown RBP13.07□□□□□ -0.32
PARVB-203ENST00000404989 TSPAN9O75954 239 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 HAGHQ16775 308 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 SOHLH1Q5JUK2 328 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 CCDC144NLQ6NUI1 221 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 OR10W1Q8NGF6 305 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 RNASEH2CQ8TDP1 164 aaKnown RBP13.07□□□□□ -0.32
PARVB-203ENST00000404989 RARRES2Q99969 163 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 BPESC1Q9GZL8 116 aa13.07□□□□□ -0.32
PARVB-203ENST00000404989 SEC14L6B5MCN3 397 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 BCL2P10415 239 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 CNTFRP26992 372 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 ICAM4Q14773 271 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 PSG5Q15238 335 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 PRSS8Q16651 343 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 ARSJQ5FYB0 599 aaPredicted RBP13.06□□□□□ -0.32
PARVB-203ENST00000404989 MINOS1Q5TGZ0 78 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 FAM122CQ6P4D5 195 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 TMEM144Q7Z5S9 345 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 CLRN3Q8NCR9 226 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 P2RX4Q99571 388 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 MGST2Q99735 147 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 GGTLC1Q9BX51 225 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 GNG13Q9P2W3 67 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 MINOS1-NBL1R4GNA1 71 aa13.06□□□□□ -0.32
PARVB-203ENST00000404989 A0A1W2PPV4 95 aa13.05□□□□□ -0.32
PARVB-203ENST00000404989 FOXH1O75593 365 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms