RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 ZNF137PP52743 207 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 PRRX1P54821 245 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 RPL23P62829 140 aaKnown RBP7.59□□□□□ -1.19
CBX1-203ENST00000402583 RPL8P62917 257 aaKnown RBP7.59□□□□□ -1.19
CBX1-203ENST00000402583 VMA21Q3ZAQ7 101 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 TMEM155Q4W5P6 130 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 MIC13Q5XKP0 118 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 TMEM144Q7Z5S9 345 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 TGIF2LXQ8IUE1 241 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 ZCCHC24Q8N2G6 241 aaKnown RBP7.59□□□□□ -1.19
CBX1-203ENST00000402583 TMEM167AQ8TBQ9 72 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 TMEM170AQ8WVE7 144 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 CACNG8Q8WXS5 425 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 NEUROG1Q92886 237 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 MDFIQ99750 246 aa7.59□□□□□ -1.19
CBX1-203ENST00000402583 PATZ1Q9HBE1 687 aaKnown RBP7.59□□□□□ -1.19
CBX1-203ENST00000402583 MUC3AQ02505 3323 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 CHD3Q12873 2000 aaKnown RBP7.58□□□□□ -1.2
CBX1-203ENST00000402583 TRBV24-1A0A075B6N3 115 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.58□□□□□ -1.2
CBX1-203ENST00000402583 H7BYZ3 331 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 CCL21O00585 134 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 PPP1R2P9O14990 202 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 IGHV2-5P01817 119 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 IGKV1-16P04430 117 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 CD99P14209 185 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 LOXP28300 417 aaPredicted RBP7.58□□□□□ -1.2
CBX1-203ENST00000402583 MEOX2P50222 304 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 ERVFRD-1P60508 538 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 FABP9Q0Z7S8 132 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 CST9LP1Q5W188 147 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 ZNF343Q6P1L6 599 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 KCNIP4Q6PIL6 250 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 LYPD2Q6UXB3 125 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 SPNS3Q6ZMD2 512 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 STPG3Q8N7X2 389 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 UHRF2Q96PU4 802 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 RNF2Q99496 336 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 C12orf57Q99622 126 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 NABP2Q9BQ15 211 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 TMEM133Q9H2Q1 129 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 CHODLQ9H9P2 273 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 DOK5Q9P104 306 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 RALYQ9UKM9 306 aaKnown RBP7.58□□□□□ -1.2
CBX1-203ENST00000402583 URGCP-MRPS24S4R325 110 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 ARL2-SNX15V9GYD0 113 aa7.58□□□□□ -1.2
CBX1-203ENST00000402583 CACNA1HO95180 2353 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 ELOA3CA0A087WX78 387 aaPredicted RBP7.57□□□□□ -1.2
CBX1-203ENST00000402583 TGIF2-C20orf24A0A0A6YYL0 155 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 FAM90A27PA6NNH2 459 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 EIF3GO75821 320 aaKnown RBP eCLIP7.57□□□□□ -1.2
CBX1-203ENST00000402583 RBP4P02753 201 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 CXCL1P09341 107 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 ARL14EPLP0DKL9 152 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 IGHV1-8P0DP01 117 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 SRP14P37108 136 aaKnown RBP7.57□□□□□ -1.2
CBX1-203ENST00000402583 LGALS7P47929 136 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 PPOXP50336 477 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 DLX6P56179 175 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 TAS2R45P59539 299 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 SSX2Q16385 188 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 HLA-DRB5Q30154 266 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 C16orf82Q7Z2V1 217 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 MUC15Q8N387 334 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 PNKDQ8N490 385 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 RNASEH2CQ8TDP1 164 aaKnown RBP7.57□□□□□ -1.2
CBX1-203ENST00000402583 SSMEM1Q8WWF3 244 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 NDUFA4L2Q9NRX3 87 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 TMEM167BQ9NRX6 74 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 CTSZQ9UBR2 303 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 SLC45A2Q9UMX9 530 aa7.57□□□□□ -1.2
CBX1-203ENST00000402583 AMMECR1Q9Y4X0 333 aaPredicted RBP7.57□□□□□ -1.2
CBX1-203ENST00000402583 SRRM4A7MD48 611 aaKnown RBP7.56□□□□□ -1.2
CBX1-203ENST00000402583 EREGO14944 169 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 WIPF1O43516 503 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 RNASE2P10153 161 aaKnown RBP7.56□□□□□ -1.2
CBX1-203ENST00000402583 GCHFRP30047 84 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 GALR1P47211 349 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 UBE2G2P60604 165 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 S100A12P80511 92 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 CD69Q07108 199 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 ZNF672Q499Z4 452 aaPredicted RBP7.56□□□□□ -1.2
CBX1-203ENST00000402583 GCSAMLQ5JQS6 135 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 LINC01560Q8TB33 94 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 ABHD5Q8WTS1 349 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 GATAD1Q8WUU5 269 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 ST6GALNAC6Q969X2 333 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 IMMP2LQ96T52 175 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 MRPL32Q9BYC8 188 aaKnown RBP7.56□□□□□ -1.2
CBX1-203ENST00000402583 RAB1BQ9H0U4 201 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 TECRQ9NZ01 308 aaKnown RBP7.56□□□□□ -1.2
CBX1-203ENST00000402583 FUT9Q9Y231 359 aa7.56□□□□□ -1.2
CBX1-203ENST00000402583 PPP5D1E7EU14 171 aa7.55□□□□□ -1.2
CBX1-203ENST00000402583 MYOD1P15172 320 aa7.55□□□□□ -1.2
CBX1-203ENST00000402583 AREGP15514 252 aa7.55□□□□□ -1.2
CBX1-203ENST00000402583 IGFBP2P18065 325 aa7.55□□□□□ -1.2
CBX1-203ENST00000402583 HOXA5P20719 270 aa7.55□□□□□ -1.2
CBX1-203ENST00000402583 S100A2P29034 98 aa7.55□□□□□ -1.2
CBX1-203ENST00000402583 ATP5G3P48201 142 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms