RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CTRB1P17538 263 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 PI3P19957 117 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 F2RP25116 425 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 PSMB6P28072 239 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 G6PCP35575 357 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 TAS2R31P59538 309 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 ERVK-16P61578 105 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 POU2AF1Q16633 256 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 VAX1Q5SQQ9 334 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 CTRB2Q6GPI1 263 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 CLEC19AQ6UXS0 136 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 TBC1D26Q86UD7 250 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 LAX1Q8IWV1 398 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 CMTM1Q8IZ96 169 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 NECAP1Q8NC96 275 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR4D10Q8NGI6 311 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR9G4Q8NGQ1 327 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR6Q1Q8NGQ2 317 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR4A5Q8NH83 315 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 CD300LFQ8TDQ1 290 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 AP3S1Q92572 193 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 DGCR14Q96DF8 476 aaKnown RBP4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 CCDC140Q96MF4 163 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 ABHD1Q96SE0 405 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 HINT2Q9BX68 163 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 COMMD5Q9GZQ3 224 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 PLEKHA2Q9HB19 425 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZC4H2Q9NQZ6 224 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 COMMD9Q9P000 198 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 SMAD5-AS1Q9Y6J3 95 aa4.39□□□□□ -1.71
HMGB1P20-201ENST00000402555 HUWE1Q7Z6Z7 4374 aaKnown RBP4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGLV11-55A0A075B6I3 123 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGHV3-21A0A0B4J1V1 117 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 TEX50A0A1B0GTY4 177 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 RGS5O15539 181 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGKV1-39P01597 117 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGKV1D-39P04432 117 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 CRYGCP07315 174 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR13C7P0DN81 318 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 DEFA4P12838 97 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 PGAM2P15259 253 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 PPP5CP53041 499 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 WT1-ASQ06250 92 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 DCTN2Q13561 401 aaKnown RBP4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 IZUMO4Q1ZYL8 232 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 RNASE10Q5GAN6 216 aaKnown RBP4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 FAAP20Q6NZ36 180 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 SBSPONQ8IVN8 264 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 CACNG8Q8WXS5 425 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 BORCS5Q969J3 196 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 AIFM2Q9BRQ8 373 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 QTRT1Q9BXR0 403 aaKnown RBP4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 MTFP1Q9UDX5 166 aa4.38□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGHV3-35A0A0C4DH35 117 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 GGCTO75223 188 aaKnown RBP4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 SNAPC5O75971 98 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 RAB3DO95716 219 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 DHFRP00374 187 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 IFNA6P05013 189 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 FRMD6-AS1P0C7T7 363 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 TRAPPC2P0DI81 140 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 TRAPPC2BP0DI82 140 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 HIST1H1BP16401 226 aaKnown RBP4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 VAMP1P23763 118 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 GPR183P32249 361 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 ARL3P36405 182 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 MFAP2P55001 183 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 UCP3P55916 312 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 TATDN3Q17R31 274 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 SCGB2B2Q4G0G5 96 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 SPINK9Q5DT21 86 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 SLC38A6Q8IZM9 456 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 Q8N1Y9 231 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR1L8Q8NGR8 309 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 DYNC2LI1Q8TCX1 351 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 RAB2BQ8WUD1 216 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 MRGPRFQ96AM1 343 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 EEF1AKMT3Q96AZ1 226 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 SEC22AQ96IW7 307 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 C6orf62Q9GZU0 229 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR51B2Q9Y5P1 312 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 U3KQK5 164 aa4.37□□□□□ -1.71
HMGB1P20-201ENST00000402555 KMT2CQ8NEZ4 4911 aaKnown RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF320A2RRD8 509 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 C2orf70A6NJV1 201 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 C15orf61A6NNL5 157 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 NPIPB6E9PJ23 425 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 H0Y980 276 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 H3BMQ9 156 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 GABARAPH6UMI1 98 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGKV1-5P01602 117 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 CD74P04233 296 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 CLEC3BP05452 202 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 SERPINE2P07093 398 aa4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 NHLRC4P0CG21 123 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P20-201ENST00000402555 IGHV4-30-4P0DP06 118 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms