RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 A0A1W2PPH5 198 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 A0A1W2PPI3 338 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 FAM24AA6NFZ4 105 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 SOX15O60248 233 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 MT-ND4LP03901 98 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 SAA1P0DJI8 122 aaPredicted RBP9.4□□□□□ -0.9
SKA3-203ENST00000400018 IGHV4-31P0DP07 118 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 HTR1DP28221 377 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 S100GP29377 79 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 CATR1Q13166 79 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 UBAC2Q8NBM4 344 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 NCOR1P1Q9H4R4 102 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 A0A0B4J2A0 478 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 K7EPK0 472 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 CHST1O43916 411 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 CST7O76096 145 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 S100A2P29034 98 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 NHLH2Q02577 135 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 TMEM267Q0VDI3 215 aaPredicted RBP9.4□□□□□ -0.91
SKA3-203ENST00000400018 OR4A47Q6IF82 309 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 H2BFWTQ7Z2G1 175 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 TMEM186Q96B77 213 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 FBXL15Q9H469 300 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 SHPKQ9UHJ6 478 aa9.4□□□□□ -0.91
SKA3-203ENST00000400018 MAST4O15021 2626 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 HIVEP2P31629 2446 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 A0A0D9SG52 128 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 VDAC1P21796 283 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 PSMB6P28072 239 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 SRSF2Q01130 221 aaKnown RBP9.39□□□□□ -0.91
SKA3-203ENST00000400018 COTL1Q14019 142 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 FAM212BQ9NTI7 297 aaPredicted RBP9.39□□□□□ -0.91
SKA3-203ENST00000400018 LINC00527Q9UJ94 153 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 TSTD3H0UI37 97 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 FSTL3O95633 263 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 PRRX1P54821 245 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 IL15RAQ13261 267 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 STOML3Q8TAV4 291 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 LPAR3Q9UBY5 353 aa9.39□□□□□ -0.91
SKA3-203ENST00000400018 NDUFS8O00217 210 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 ST8SIA3O43173 380 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 SNRNP70P08621 437 aaKnown RBP9.38□□□□□ -0.91
SKA3-203ENST00000400018 RAB5AP20339 215 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 CAV2P51636 162 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 PKIAP61925 76 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 PAX8Q06710 450 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 TNFRSF9Q07011 255 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 TPTE2P1Q5T6R2 138 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 KCNRGQ8N5I3 272 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 FAM24BQ8N5W8 94 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 OR4D5Q8NGN0 318 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 GAR1Q9NY12 217 aaKnown RBP9.38□□□□□ -0.91
SKA3-203ENST00000400018 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 DPM3Q9P2X0 92 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 IGHV3-21A0A0B4J1V1 117 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 RNF222A6NCQ9 220 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 ODF3BA8MYP8 253 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 LY6LH3BQJ8 138 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 BCL2L11O43521 198 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 GOSR1O95249 250 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 SFTA3P0C7M3 94 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 LBHQ53QV2 105 aaPredicted RBP9.38□□□□□ -0.91
SKA3-203ENST00000400018 ZNF66Q6ZN08 573 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 GAB2Q9UQC2 676 aa9.38□□□□□ -0.91
SKA3-203ENST00000400018 A0A1W2PPE2 198 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 NCBP2LA6PVI3 153 aaKnown RBP9.37□□□□□ -0.91
SKA3-203ENST00000400018 B4DSR2 109 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 M0R1W7 72 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 IFNA17P01571 189 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 HOXA5P20719 270 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 NKX2-1P43699 371 aaPredicted RBP9.37□□□□□ -0.91
SKA3-203ENST00000400018 AARDQ4LEZ3 155 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 MIDNQ504T8 468 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 PDZD11Q5EBL8 140 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 LRTM2Q8N967 370 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 FLYWCH2Q96CP2 140 aaKnown RBP9.37□□□□□ -0.91
SKA3-203ENST00000400018 HRH4Q9H3N8 390 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 BEX4Q9NWD9 120 aaPredicted RBP9.37□□□□□ -0.91
SKA3-203ENST00000400018 A0A1B0GW64 132 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 NPFFO15130 113 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 ZNF25P17030 456 aaPredicted RBP9.37□□□□□ -0.91
SKA3-203ENST00000400018 NDUFA6P56556 154 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 MLANAQ16655 118 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 OR11H6Q8NGC7 330 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 OR5AN1Q8NGI8 311 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 PHYHIPLQ96FC7 376 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 KPTNQ9Y664 436 aa9.37□□□□□ -0.91
SKA3-203ENST00000400018 HPRT1P00492 218 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 IFNA10P01566 189 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 IGLV2-23P01705 113 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 CDX1P47902 265 aaPredicted RBP9.36□□□□□ -0.91
SKA3-203ENST00000400018 THBS3P49746 956 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 PAX9P55771 341 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 MMDQ15546 238 aa9.36□□□□□ -0.91
SKA3-203ENST00000400018 SPANXN5Q5MJ07 72 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms