RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NPCDR1Q9BY65 106 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 FBXL15Q9H469 300 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 ADCYAP1P18509 176 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 GNG4P50150 75 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 SUMO1P63165 101 aaKnown RBP11.6□□□□□ -0.55
SCAF4-202ENST00000399804 LYPD2Q6UXB3 125 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 NPIPB3Q92617 1050 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 RNF2Q99496 336 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 TOLLIPQ9H0E2 274 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 TMEM133Q9H2Q1 129 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 TMPRSS5Q9H3S3 457 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 RFNGQ9Y644 331 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 SPEGQ15772 3267 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 EML5Q05BV3 1969 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 CLN5O75503 358 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 ECSCRQ19T08 205 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
SCAF4-202ENST00000399804 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
SCAF4-202ENST00000399804 A1L4Q6 167 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 PDPNQ86YL7 162 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 C11orf53Q8IXP5 236 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 ZNF331Q9NQX6 463 aaPredicted RBP11.59□□□□□ -0.55
SCAF4-202ENST00000399804 TNFRSF19Q9NS68 423 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 GALR1P47211 349 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 KHDC1LQ5JSQ8 128 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 OR4F17Q8NGA8 305 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
SCAF4-202ENST00000399804 KIAA1324LA8MWY0 1029 aaPredicted RBP11.58□□□□□ -0.55
SCAF4-202ENST00000399804 COX6B1P14854 86 aa11.58□□□□□ -0.55
SCAF4-202ENST00000399804 FABP9Q0Z7S8 132 aa11.58□□□□□ -0.55
SCAF4-202ENST00000399804 BAGE3Q86Y29 109 aa11.58□□□□□ -0.55
SCAF4-202ENST00000399804 BAGE2Q86Y30 109 aa11.58□□□□□ -0.55
SCAF4-202ENST00000399804 SPINK4O60575 86 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 NDUFB4O95168 129 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 COL8A2P25067 703 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 SPNS3Q6ZMD2 512 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 UPK2O00526 184 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 THBDP07204 575 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 FAM106CPP0CH98 169 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 GATA4P43694 442 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 TMEM37Q8WXS4 190 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 C15orf61A6NNL5 157 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 PDE6DO43924 150 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 STPG3Q8N7X2 389 aa11.58□□□□□ -0.56
SCAF4-202ENST00000399804 BARX1Q9HBU1 254 aaPredicted RBP11.58□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF785A8K8V0 405 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF705GA8MUZ8 300 aaPredicted RBP11.57□□□□□ -0.56
SCAF4-202ENST00000399804 CFHR2P36980 270 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 PDLIM4P50479 330 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 SELENOTP62341 195 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 TRAV3A0A0B4J244 114 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 LYL1P12980 280 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 CD24P25063 80 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 RANP62826 216 aaKnown RBP11.57□□□□□ -0.56
SCAF4-202ENST00000399804 HLA-DRB5Q30154 266 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 LINC00587B1AMM8 73 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 HYPMO75409 117 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 PERPQ96FX8 193 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF430Q9H8G1 570 aaPredicted RBP11.57□□□□□ -0.56
SCAF4-202ENST00000399804 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
SCAF4-202ENST00000399804 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF705FA8MVS1 300 aaPredicted RBP11.56□□□□□ -0.56
SCAF4-202ENST00000399804 RRHO14718 337 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF705DP0CH99 300 aaPredicted RBP11.56□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF705BP0CI00 300 aaPredicted RBP11.56□□□□□ -0.56
SCAF4-202ENST00000399804 Q8WTZ3 238 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 CCL19Q99731 98 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 B4DEV8 164 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
SCAF4-202ENST00000399804 TGOLN2O43493 480 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 IGFBP2P18065 325 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 CCL20P78556 96 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 IFI27L2Q9H2X8 130 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 HELTA6NFD8 242 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 FOXH1O75593 365 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 FXYD3Q14802 87 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 ZNF383Q8NA42 475 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 OR5AU1Q8NGC0 362 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 PAXXQ9BUH6 204 aa11.56□□□□□ -0.56
SCAF4-202ENST00000399804 CORTO00230 105 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 RAB5AP20339 215 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 SPRNQ5BIV9 151 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 FAM222BQ8WU58 562 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 PIMREGQ9BSJ6 248 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 DNAJC4Q9NNZ3 241 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 PTPN13Q12923 2485 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 TMEM50AO95807 157 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 IGKV1D-33P01593 117 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 IGKV1-33P01594 117 aa11.55□□□□□ -0.56
SCAF4-202ENST00000399804 IL6RP08887 468 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms