RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 TIMP3P35625 211 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 FOXB2Q5VYV0 432 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 TMEM219Q86XT9 240 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 KCNS1Q96KK3 526 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 FOXC2Q99958 501 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 TXNDC17Q9BRA2 123 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 KCNE5Q9UJ90 142 aa10.16□□□□□ -0.78
CACNA1C-213ENST00000399629 TRAV41A0A0B4J266 112 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 TRBV5-5A0A0J9YX44 114 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 VN1R17PQ8TDU5 208 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 MARVELD1Q9BSK0 173 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 C21orf62-AS1Q17RA5 79 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 COL25A1Q9BXS0 654 aaPredicted RBP10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 TRGV11A0A075B6L2 103 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 HSPB1P04792 205 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 MUC21Q5SSG8 566 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 BEX4Q9NWD9 120 aaPredicted RBP10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 LINC00527Q9UJ94 153 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 PLXNA1Q9UIW2 1896 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 EIF4EBP2Q13542 120 aaPredicted RBP10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 ERASQ7Z444 233 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 REC114Q7Z4M0 266 aa10.15□□□□□ -0.78
CACNA1C-213ENST00000399629 LINC00862A6NCI5 91 aa10.15□□□□□ -0.79
CACNA1C-213ENST00000399629 KLF4O43474 513 aa10.15□□□□□ -0.79
CACNA1C-213ENST00000399629 BEND2Q8NDZ0 799 aa10.15□□□□□ -0.79
CACNA1C-213ENST00000399629 PLAC1Q9HBJ0 212 aa10.15□□□□□ -0.79
CACNA1C-213ENST00000399629 TUBD1Q9UJT1 453 aa10.15□□□□□ -0.79
CACNA1C-213ENST00000399629 IGKV1D-42A0A075B6H8 117 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 C12orf77C9JDV5 145 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 TMEM91Q6ZNR0 172 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 CTHRC1Q96CG8 243 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 SNRPEP62304 92 aaKnown RBP10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 LCNL1Q6ZST4 164 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 WFDC12Q8WWY7 111 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 GGCTO75223 188 aaKnown RBP10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 PAX8Q06710 450 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 CNTRLQ7Z7A1 2325 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 TRBV7-9A0A0J9YWB2 115 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 ISOC2Q96AB3 205 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 SMIM8Q96KF7 97 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 PRR32B1ATL7 298 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 TMEM250H0YL14 139 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 TMEM183AQ8IXX5 376 aa10.14□□□□□ -0.79
CACNA1C-213ENST00000399629 PSMG4Q5JS54 123 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 C1QTNF5Q9BXJ0 243 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 A0A0G2JNJ9 132 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 NTN3O00634 580 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 ASPHD2Q6ICH7 369 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 LRTM2Q8N967 370 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 OR5AC2Q9NZP5 309 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 Q9UFV3 132 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 ADARB2-AS1A8MUL3 147 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 C1QTNF9BB2RNN3 333 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 C1QTNF9P0C862 333 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 FAM110DQ8TAY7 271 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 SIRT4Q9Y6E7 314 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 MT-ND6P03923 174 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 BRD3OSQ6XYD6 125 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 OR10AG1Q8NH19 301 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 MRPS18AQ9NVS2 196 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 MTCL1Q9Y4B5 1905 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 PCM1Q15154 2024 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 TRBV5-3A0A0A0MS03 114 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 CA7P43166 264 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 RNASEH2CQ8TDP1 164 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 SELENOKQ9Y6D0 94 aa10.13□□□□□ -0.79
CACNA1C-213ENST00000399629 TIMM23O14925 209 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 ZNF25P17030 456 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 OR10J3Q5JRS4 329 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 CD8AP01732 235 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 SAA1P0DJI8 122 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 EFNB1P98172 346 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 MRPL13Q9BYD1 178 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 PEX7O00628 323 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 FOXF2Q12947 444 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 VWCEQ96DN2 955 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 H3BUX3 64 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 RRHO14718 337 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 NBEAP1P0C6P0 100 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 KLRD1Q13241 179 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 C11orf68Q9H3H3 251 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 TMEM160Q9NX00 188 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 A0A087WX48 190 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 IGHV1-46P01743 117 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 HLA-DQA1P01909 254 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 OR9G9P0C7N8 305 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 GCHFRP30047 84 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 GATAD1Q8WUU5 269 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 SCGB3A1Q96QR1 104 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 SLC50A1Q9BRV3 221 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 TRPM7Q96QT4 1865 aa10.12□□□□□ -0.79
CACNA1C-213ENST00000399629 PINLYPA6NC86 204 aa10.11□□□□□ -0.79
CACNA1C-213ENST00000399629 LEPROTL1O95214 131 aa10.11□□□□□ -0.79
CACNA1C-213ENST00000399629 KIR3DL3Q8N743 410 aa10.11□□□□□ -0.79
CACNA1C-213ENST00000399629 NPIPB13A6NJU9 1138 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms