RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 GPBAR1Q8TDU6 330 aa10.66□□□□□ -0.7
CACNA1C-209ENST00000399603 MESP2Q0VG99 397 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 C2orf68Q2NKX9 166 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 LCNL1Q6ZST4 164 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 SELENOHQ8IZQ5 122 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 ST6GALNAC2Q9UJ37 374 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 DDX60Q8IY21 1712 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 CA11O75493 328 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 CA7P43166 264 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 FOXA2Q9Y261 457 aaPredicted RBP10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 IL11P20809 199 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 ITLN1Q8WWA0 313 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 NDUFS5O43920 106 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 IGKCP01834 107 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 LIPT2A6NK58 231 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 HIGD1CA8MV81 97 aa10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 MARS2Q96GW9 593 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-209ENST00000399603 NPIPB13A6NJU9 1138 aa10.65□□□□□ -0.71
CACNA1C-209ENST00000399603 MARCH11A6NNE9 402 aa10.65□□□□□ -0.71
CACNA1C-209ENST00000399603 NPIPB5A8MRT5 1133 aa10.65□□□□□ -0.71
CACNA1C-209ENST00000399603 NPIPB11E5RHQ5 1161 aa10.65□□□□□ -0.71
CACNA1C-209ENST00000399603 GTSCR1Q86UQ5 136 aa10.65□□□□□ -0.71
CACNA1C-209ENST00000399603 RPP21Q9H633 154 aaKnown RBP10.65□□□□□ -0.71
CACNA1C-209ENST00000399603 RPRMQ9NS64 109 aa10.65□□□□□ -0.71
CACNA1C-209ENST00000399603 MGST3O14880 152 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 NBEAP1P0C6P0 100 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 CT55Q8WUE5 264 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 ZNF385AQ96PM9 386 aaKnown RBP10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 RTTNQ86VV8 2226 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 SCN3AQ9NY46 2000 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 PSCAO43653 123 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 FAM214BQ7L5A3 538 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 ERVH48-1M5A8F1 160 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 FOXL1Q12952 345 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 FBXW9Q5XUX1 488 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 TMPRSS3P57727 454 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 SPSB2Q99619 263 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 PPIAL4CA0A0B4J2A2 164 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 PPIAL4GP0DN37 164 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 IDI2-AS1Q9NZ38 188 aa10.64□□□□□ -0.71
CACNA1C-209ENST00000399603 TRAV12-1A0A0B4J245 112 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 MRPL32Q9BYC8 188 aaKnown RBP10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 FAM60AQ9NP50 221 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 ADMP35318 185 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 RBM3P98179 157 aaKnown RBP10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 CYP2G1PQ6ZSU1 146 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 STHQ8IWL8 128 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 KLHDC2Q9Y2U9 406 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 POC1AQ8NBT0 407 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 A0A0G2JLM5 398 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 UMODP07911 640 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 SRSF1Q07955 248 aaKnown RBP eCLIP10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 DMRTC2Q8IXT2 367 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 C1orf162Q8NEQ5 155 aaPredicted RBP10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 ESPL1Q14674 2120 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 PRR31Q5SQ13 230 aa10.63□□□□□ -0.71
CACNA1C-209ENST00000399603 IGHV3-73A0A0B4J1V6 119 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 PQLC2LA1A4F0 135 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 RNASE7Q9H1E1 156 aaKnown RBP10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 CD5P06127 495 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 HAPLN4Q86UW8 402 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 GCSAMQ8N6F7 178 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 TCF19Q9Y242 345 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 GPX4P36969 197 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 PDLIM4P50479 330 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 SHISA5Q8N114 240 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 TRACP01848 142 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 IL6RP08887 468 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 TRIP6Q15654 476 aaKnown RBP10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 APOBEC4Q8WW27 367 aaKnown RBP10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 TMEM126AQ9H061 195 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 CLEC19AQ6UXS0 136 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 RASL10BQ96S79 203 aa10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 NUP214P35658 2090 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-209ENST00000399603 DANCRP0C864 163 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 EGR4Q05215 589 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 OR5P3Q8WZ94 311 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 ATP5G3P48201 142 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 TMEM258P61165 79 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 COX14Q96I36 57 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 SHROOM3Q8TF72 1996 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 TRAV9-2A0A087WT02 112 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 IGHV3-11P01762 117 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 HAMPP81172 84 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 BAALCQ8WXS3 180 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 CCL3P10147 92 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 ATP5L2Q7Z4Y8 100 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 UCP2P55851 309 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 SF3B5Q9BWJ5 86 aaKnown RBP10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 PAPPA2Q9BXP8 1791 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 ZNF729A6NN14 1252 aaPredicted RBP10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 A8MXK9 166 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 PATE3B3GLJ2 98 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
CACNA1C-209ENST00000399603 GNG5P63218 68 aa10.6□□□□□ -0.71
CACNA1C-209ENST00000399603 SNHG12Q9BXW3 62 aa10.6□□□□□ -0.71
CACNA1C-209ENST00000399603 BCL6BQ8N143 479 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms