RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 WNT10AQ9GZT5 417 aa11.13□□□□□ -0.63
ITSN1-208ENST00000399349 PRR32B1ATL7 298 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 SNAI2O43623 268 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 STAG3L2P0CL84 134 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 FAM106AQ4KMX7 169 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 DLX6P56179 175 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 TMEM106BQ9NUM4 274 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 KIAA2026Q5HYC2 2103 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 GFRA3O60609 400 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 ATP5G3P48201 142 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 NBEAP1P0C6P0 100 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 LCN2P80188 198 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 LINC00470Q9BZP3 86 aa11.12□□□□□ -0.63
ITSN1-208ENST00000399349 TRBV20OR9-2A0A075B6H5 130 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 FABP2P12104 132 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 UCP1P25874 307 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 ZNF56Q15929 161 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 TCF24Q7RTU0 167 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 GPR82Q96P67 336 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 RBFOX2O43251 390 aaKnown RBP eCLIP11.11□□□□□ -0.63
ITSN1-208ENST00000399349 EFNB1P98172 346 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 TIMM23BQ5SRD1 257 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 SYT8Q8NBV8 401 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 PSMG3Q9BT73 122 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-208ENST00000399349 FOXA2Q9Y261 457 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-208ENST00000399349 SCO2A0A1W2PP80 73 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 A1L4Q6 167 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 M0R381 172 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 PLP1P60201 277 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 C12orf54Q6X4T0 127 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 TM2D1Q9BX74 207 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 TRAV30A0A087WSZ9 112 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 UBE2L6O14933 153 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 HOXA5P20719 270 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 LINC00114Q6XXX2 140 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 CYP2G1PQ6ZSU1 146 aa11.11□□□□□ -0.63
ITSN1-208ENST00000399349 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
ITSN1-208ENST00000399349 ZNF256Q9Y2P7 627 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-208ENST00000399349 COL5A3P25940 1745 aaPredicted RBP11.1□□□□□ -0.63
ITSN1-208ENST00000399349 PSMB11A5LHX3 300 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
ITSN1-208ENST00000399349 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 GALNT14Q96FL9 552 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 ZNF646O15015 1829 aaPredicted RBP11.1□□□□□ -0.63
ITSN1-208ENST00000399349 CCL3L1P16619 93 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 CA7P43166 264 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 BEX4Q9NWD9 120 aaPredicted RBP11.1□□□□□ -0.63
ITSN1-208ENST00000399349 IGKV1D-13A0A0B4J2D9 117 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 IGKV1-13P0DP09 117 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 PSG9Q00887 426 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 ABHD17AQ96GS6 310 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 IMMP1LQ96LU5 166 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 IFI27L2Q9H2X8 130 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 PI4KAP42356 2102 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 B9A039 149 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 UMODP07911 640 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 IGHV1-2P23083 117 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
ITSN1-208ENST00000399349 ST6GALNAC6Q969X2 333 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 C14orf144Q96I85 54 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 ZNF319Q9P2F9 582 aa11.1□□□□□ -0.63
ITSN1-208ENST00000399349 CD24P25063 80 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 PLPPR1Q8TBJ4 325 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 HEATR1Q9H583 2144 aaKnown RBP11.09□□□□□ -0.63
ITSN1-208ENST00000399349 IGHV2OR16-5A0A0B4J2B6 119 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 A6NJY4 79 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 IGKV1D-33P01593 117 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 IGKV1-33P01594 117 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 TRGV3P03979 118 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 UBE2CO00762 179 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 TNFSF10P50591 281 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 CHRNA10Q9GZZ6 450 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 COX6CP09669 75 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 APOBEC3AP31941 199 aaPredicted RBP11.09□□□□□ -0.63
ITSN1-208ENST00000399349 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 C1QTNF5Q9BXJ0 243 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 TMEM160Q9NX00 188 aa11.09□□□□□ -0.63
ITSN1-208ENST00000399349 SRP19P09132 144 aaKnown RBP11.08□□□□□ -0.63
ITSN1-208ENST00000399349 CTAG1AP78358 180 aa11.08□□□□□ -0.63
ITSN1-208ENST00000399349 MRPL20Q9BYC9 149 aaKnown RBP11.08□□□□□ -0.63
ITSN1-208ENST00000399349 COLCA2A8K830 154 aa11.08□□□□□ -0.64
ITSN1-208ENST00000399349 IFNL4K9M1U5 179 aa11.08□□□□□ -0.64
ITSN1-208ENST00000399349 CD55P08174 381 aa11.08□□□□□ -0.64
ITSN1-208ENST00000399349 GPR183P32249 361 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms