RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TFF3Q07654 80 aa9.66□□□□□ -0.86
COL25A1-202ENST00000399127 C4orf17Q53FE4 359 aa9.66□□□□□ -0.86
COL25A1-202ENST00000399127 CFAP161Q6P656 301 aa9.66□□□□□ -0.86
COL25A1-202ENST00000399127 LYPD2Q6UXB3 125 aa9.66□□□□□ -0.86
COL25A1-202ENST00000399127 RNASE6Q93091 150 aaKnown RBP9.66□□□□□ -0.86
COL25A1-202ENST00000399127 TMEM140Q9NV12 185 aa9.66□□□□□ -0.86
COL25A1-202ENST00000399127 IDI2-AS1Q9NZ38 188 aa9.66□□□□□ -0.86
COL25A1-202ENST00000399127 KIAA1456Q9P272 454 aa9.66□□□□□ -0.86
COL25A1-202ENST00000399127 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
COL25A1-202ENST00000399127 TMEM8BA6NDV4 472 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 NKX6-3A6NJ46 265 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 ZFP92A6NM28 416 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 RAB7AP51149 207 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 ERVK-16P61578 105 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 RPL31P62899 125 aaKnown RBP9.65□□□□□ -0.86
COL25A1-202ENST00000399127 SOHLH1Q5JUK2 328 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 OR10P1Q8NGE3 313 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 DDB2Q92466 427 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 H1FXQ92522 213 aaKnown RBP9.65□□□□□ -0.86
COL25A1-202ENST00000399127 RCC1LQ96I51 464 aaKnown RBP9.65□□□□□ -0.86
COL25A1-202ENST00000399127 ASH1LQ9NR48 2969 aaKnown RBP9.65□□□□□ -0.86
COL25A1-202ENST00000399127 TNCP24821 2201 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 PPIAL4EA0A075B759 164 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 TRAV38-1A0A0B4J264 116 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.65□□□□□ -0.86
COL25A1-202ENST00000399127 PPIAL4DF5H284 164 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 TMEM178BH3BS89 294 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 IGKV1D-33P01593 117 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 IGKV1-33P01594 117 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 PPIAL4FP0DN26 164 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 DEFA4P12838 97 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 ICAM4Q14773 271 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 ZNF705AQ6ZN79 300 aaPredicted RBP9.65□□□□□ -0.86
COL25A1-202ENST00000399127 C11orf42Q8N5U0 333 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 CYB561D1Q8N8Q1 229 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 ZNF439Q8NDP4 499 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 CLDND2Q8NHS1 167 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 PSMG3Q9BT73 122 aaPredicted RBP9.65□□□□□ -0.86
COL25A1-202ENST00000399127 NGBQ9NPG2 151 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 PPIAL4AQ9Y536 164 aa9.65□□□□□ -0.86
COL25A1-202ENST00000399127 SPTBN1Q01082 2364 aaKnown RBP9.65□□□□□ -0.87
COL25A1-202ENST00000399127 hADV38S2A0JD32 116 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 SCAF4O95104 1147 aaKnown RBP9.64□□□□□ -0.87
COL25A1-202ENST00000399127 MYOD1P15172 320 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 RELBQ01201 579 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 SP5Q6BEB4 398 aaPredicted RBP9.64□□□□□ -0.87
COL25A1-202ENST00000399127 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 ACSM6Q6P461 480 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
COL25A1-202ENST00000399127 TMEM183AQ8IXX5 376 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 OR4S2Q8NH73 311 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 CIB3Q96Q77 187 aaPredicted RBP9.64□□□□□ -0.87
COL25A1-202ENST00000399127 HEYLQ9NQ87 328 aaPredicted RBP9.64□□□□□ -0.87
COL25A1-202ENST00000399127 TMEM106BQ9NUM4 274 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 PITPNC1Q9UKF7 332 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 SVEP1Q4LDE5 3571 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 C15orf62A8K5M9 175 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 K7EP13 123 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 CHRNB4P30926 498 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 CDSNQ15517 529 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 DPPA3Q6W0C5 159 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 SLC35E3Q7Z769 313 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 ABHD12Q8N2K0 398 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 RPP25LQ8N5L8 163 aaKnown RBP9.64□□□□□ -0.87
COL25A1-202ENST00000399127 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 TMEM147Q9BVK8 224 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 RAB9BQ9NP90 201 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 RPUSD1Q9UJJ7 312 aaKnown RBP9.64□□□□□ -0.87
COL25A1-202ENST00000399127 CACNA1AO00555 2505 aa9.64□□□□□ -0.87
COL25A1-202ENST00000399127 A0A1B0GW64 132 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 C20orf202A1L168 122 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 LYNX1G3V0Z9 82 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 RBFOX2O43251 390 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL25A1-202ENST00000399127 HBE1P02100 147 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 IGKV1-16P04430 117 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
COL25A1-202ENST00000399127 LYNX1P0DP58 116 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 BMI1P35226 326 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 SERF2P84101 59 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 ADORA2A-AS1P86434 159 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 TMEM41BQ5BJD5 291 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 OR4A47Q6IF82 309 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
COL25A1-202ENST00000399127 HINT2Q9BX68 163 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 SLC25A22Q9H936 323 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 KIR2DL5BA0A0G2JN68 375 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 KIR2DL5BA0A0G2JPC4 375 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 A6NJY4 79 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 VSTM5A8MXK1 200 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 RRHO14718 337 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 PPBPP02775 128 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 OPN1MWP04001 364 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 OPN1MW2P0DN77 364 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 OPN1MW3P0DN78 364 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 REG1BP48304 166 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 SELENOTP62341 195 aa9.63□□□□□ -0.87
COL25A1-202ENST00000399127 BATFQ16520 125 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms