RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 MED12LQ86YW9 2145 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 A0A1W2PS18 150 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 HAX1O00165 279 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 NDUFS7O75251 213 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 SLC25A5P05141 298 aaKnown RBP6.79□□□□□ -1.32
PTPRD-204ENST00000397606 BLNKQ8WV28 456 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 EML6Q6ZMW3 1958 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 LHBP01229 141 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 CXCL2P19875 107 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 PSG5Q15238 335 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 KHDC3LQ587J8 217 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 MOB4Q9Y3A3 225 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 NCOA6Q14686 2063 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-204ENST00000397606 J3QLI3 93 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 SLC31A2O15432 143 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 GALR1P47211 349 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 AKR1D1P51857 326 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 DEFB113Q30KQ7 82 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 UQCC3Q6UW78 93 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 BRD3OSQ6XYD6 125 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 RNASEH2CQ8TDP1 164 aaKnown RBP6.79□□□□□ -1.32
PTPRD-204ENST00000397606 METTL26Q96S19 204 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 MANBALQ9NQG1 85 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 ANAPC10Q9UM13 185 aa6.79□□□□□ -1.32
PTPRD-204ENST00000397606 RELQ04864 619 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-204ENST00000397606 TUSC1Q2TAM9 212 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 OR4X2Q8NGF9 303 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 IFI27L2Q9H2X8 130 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 XKRY2A2RUG3 117 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 CXorf1O96002 111 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 RUNX1Q01196 453 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 ZNF880Q6PDB4 577 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 DUX4L9Q6RFH8 374 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-204ENST00000397606 CACNG8Q8WXS5 425 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 NPIPB3Q92617 1050 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 FRZBQ92765 325 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 NABP2Q9BQ15 211 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 REG4Q9BYZ8 158 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 FGF23Q9GZV9 251 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-204ENST00000397606 TNRC6AQ8NDV7 1962 aaKnown RBP6.78□□□□□ -1.32
PTPRD-204ENST00000397606 IGKV1-6A0A0C4DH72 117 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 OR2J3O76001 311 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 SAA4P35542 130 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 RPL30P62888 115 aaKnown RBP6.78□□□□□ -1.32
PTPRD-204ENST00000397606 C5orf24Q7Z6I8 188 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 KIR3DL3Q8N743 410 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 FBXL7Q9UJT9 491 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 A0A0B4J293 547 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 RNASEK-C17orf49H0YIS7 233 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 H0YJW9 148 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 AP4M1O00189 453 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 HOXA4Q00056 320 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-204ENST00000397606 OR52E5Q8NH55 327 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 ZNF257Q9Y2Q1 563 aa6.78□□□□□ -1.32
PTPRD-204ENST00000397606 TNRC6BQ9UPQ9 1833 aaKnown RBP6.78□□□□□ -1.32
PTPRD-204ENST00000397606 MPTX1A8MV57 137 aa6.77□□□□□ -1.32
PTPRD-204ENST00000397606 H3BUX3 64 aa6.77□□□□□ -1.32
PTPRD-204ENST00000397606 H7BYZ3 331 aa6.77□□□□□ -1.32
PTPRD-204ENST00000397606 IGHV2-5P01817 119 aa6.77□□□□□ -1.32
PTPRD-204ENST00000397606 FGF8P55075 233 aaPredicted RBP6.77□□□□□ -1.32
PTPRD-204ENST00000397606 PRCDQ00LT1 54 aa6.77□□□□□ -1.32
PTPRD-204ENST00000397606 RSG1Q9BU20 258 aa6.77□□□□□ -1.32
PTPRD-204ENST00000397606 C19orf24Q9BVV8 132 aa6.77□□□□□ -1.32
PTPRD-204ENST00000397606 ANOS1P23352 680 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 RAB9AP51151 201 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 RAB5BP61020 215 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 SUPT4H1P63272 117 aaKnown RBP6.77□□□□□ -1.33
PTPRD-204ENST00000397606 ID3Q02535 119 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 C17orf58Q2M2W7 97 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 BIVMQ86UB2 503 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 ZNF383Q8NA42 475 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 C21orf62Q9NYP8 219 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV4-39P01824 125 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 PRSS8Q16651 343 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 C2orf68Q2NKX9 166 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 C1orf122Q6ZSJ8 110 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 LINC00311Q8N616 119 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 STPG3Q8N7X2 389 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 RAB19A4D1S5 217 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 CLN5O75503 358 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 TPPP3Q9BW30 176 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 WNT10AQ9GZT5 417 aa6.77□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV1-69DA0A0B4J2H0 117 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 IGHV1-69P01742 117 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 VDAC2P45880 294 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-204ENST00000397606 RPEL1Q2QD12 228 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 TMEM177Q53S58 311 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 Q5BKY6 102 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 MIC13Q5XKP0 118 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 LYPD6Q86Y78 171 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 TMEM167AQ8TBQ9 72 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 DNAJC4Q9NNZ3 241 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 ELOA3CA0A087WX78 387 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-204ENST00000397606 IGSF23A1L1A6 192 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 LINC00473A8K010 186 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 OR9G9P0C7N8 305 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 PQLC2Q6ZP29 291 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 BPIFA4PQ86YQ2 179 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 OR11H4Q8NGC9 324 aa6.76□□□□□ -1.33
PTPRD-204ENST00000397606 EAF1Q96JC9 268 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms