RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 RBMXL2O75526 392 aaKnown RBP10.64□□□□□ -0.71
SEC13-204ENST00000397099 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 CD74P04233 296 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 CD3DP04234 171 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 FAM106AQ4KMX7 169 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 PHLDA2Q53GA4 152 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 LHFPL1Q86WI0 220 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 LAX1Q8IWV1 398 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 GDPD1Q8N9F7 314 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 TERB2Q8NHR7 220 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 VN1R17PQ8TDU5 208 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 ASCL2Q99929 193 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 NDUFA4L2Q9NRX3 87 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 TEX50A0A1B0GTY4 177 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 CGB1A6NKQ9 187 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 A8MZ25 164 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 CSN3P07498 182 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 PGAM2P15259 253 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 G6PCP35575 357 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 ARL3P36405 182 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 DEFA5Q01523 94 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 SPCS2Q15005 226 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 STEAP1BQ6NZ63 245 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 IL34Q6ZMJ4 242 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 H2BFWTQ7Z2G1 175 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 GTSCR1Q86UQ5 136 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 SGPP2Q8IWX5 399 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 OR4A16Q8NH70 328 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 DYNC2LI1Q8TCX1 351 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 SMIM4Q8WVI0 70 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 GAR1Q9NY12 217 aaKnown RBP10.63□□□□□ -0.71
SEC13-204ENST00000397099 TECRQ9NZ01 308 aaKnown RBP10.63□□□□□ -0.71
SEC13-204ENST00000397099 RSL24D1Q9UHA3 163 aaKnown RBP10.63□□□□□ -0.71
SEC13-204ENST00000397099 OR51B2Q9Y5P1 312 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 U3KQK5 164 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 STAB2Q8WWQ8 2551 aa10.63□□□□□ -0.71
SEC13-204ENST00000397099 TRAV3A0A0B4J244 114 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 M0QYG6 137 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 NDUFB8O95169 186 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 RAB3DO95716 219 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 OR13C7P0DN81 318 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 SURF2Q15527 256 aaPredicted RBP10.62□□□□□ -0.71
SEC13-204ENST00000397099 CLEC19AQ6UXS0 136 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 DIRAS2Q96HU8 199 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 SEC22AQ96IW7 307 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 PALMDQ9NP74 551 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 COPZ2Q9P299 210 aa10.62□□□□□ -0.71
SEC13-204ENST00000397099 A8MWP6 167 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 DISC1C4P0D8 188 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 CTDSP2O14595 271 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 REG1AP05451 166 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 MECP2P51608 486 aaKnown RBP10.61□□□□□ -0.71
SEC13-204ENST00000397099 PIGPP57054 158 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 IL18Q14116 193 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 SPSB3Q6PJ21 355 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 MARC2Q969Z3 335 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 DMRT1Q9Y5R6 373 aa10.61□□□□□ -0.71
SEC13-204ENST00000397099 F11RQ9Y624 299 aaKnown RBP10.61□□□□□ -0.71
SEC13-204ENST00000397099 PPP5D1E7EU14 171 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 CLEC3BP05452 202 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 AKAIN1P0CW23 69 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 MYOD1P15172 320 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 ELLP55199 621 aaPredicted RBP10.6□□□□□ -0.71
SEC13-204ENST00000397099 WT1-ASQ06250 92 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
SEC13-204ENST00000397099 OR10W1Q8NGF6 305 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 OR1P1Q8NH06 330 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 ZNF502Q8TBZ5 544 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 ISOC1Q96CN7 298 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 BSCL2Q96G97 398 aaPredicted RBP10.6□□□□□ -0.71
SEC13-204ENST00000397099 SCGB3A2Q96PL1 93 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 PRRT1Q99946 306 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 HINT2Q9BX68 163 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 C6orf62Q9GZU0 229 aaPredicted RBP10.6□□□□□ -0.71
SEC13-204ENST00000397099 ZMAT4Q9H898 229 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 CACFD1Q9UGQ2 172 aa10.6□□□□□ -0.71
SEC13-204ENST00000397099 C14orf166Q9Y224 244 aaKnown RBP10.6□□□□□ -0.71
SEC13-204ENST00000397099 PIGBOS1A0A0B4J2F0 54 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 C3orf85A0A1B0GTC6 90 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 C2orf70A6NJV1 201 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 H3BMQ9 156 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 GSTZ1O43708 216 aaPredicted RBP10.59□□□□□ -0.71
SEC13-204ENST00000397099 OR2C1O95371 312 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 CTSDP07339 412 aaPredicted RBP10.59□□□□□ -0.71
SEC13-204ENST00000397099 HSPE1P61604 102 aaKnown RBP10.59□□□□□ -0.71
SEC13-204ENST00000397099 ERHP84090 104 aaKnown RBP10.59□□□□□ -0.71
SEC13-204ENST00000397099 SCGB2B2Q4G0G5 96 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 SLC25A24Q6NUK1 477 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 PLET1Q6UQ28 207 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 ZNF114Q8NC26 417 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 SLIRPQ9GZT3 109 aaKnown RBP10.59□□□□□ -0.71
SEC13-204ENST00000397099 SLC2A8Q9NY64 477 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 UFC1Q9Y3C8 167 aa10.59□□□□□ -0.71
SEC13-204ENST00000397099 MFSD2BA6NFX1 497 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 FRMD6-AS1P0C7T7 363 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms