RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 RNF5Q99942 180 aa8.08□□□□□ -1.12
NEDD8-202ENST00000396828 NMES1Q9C002 83 aa8.08□□□□□ -1.12
NEDD8-202ENST00000396828 PLSCR3Q9NRY6 295 aa8.08□□□□□ -1.12
NEDD8-202ENST00000396828 GSKIPQ9P0R6 139 aa8.08□□□□□ -1.12
NEDD8-202ENST00000396828 A0A1B0GU03 582 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 NUDT19A8MXV4 375 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 FGF16O43320 207 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 RBMXL2O75526 392 aaKnown RBP8.07□□□□□ -1.12
NEDD8-202ENST00000396828 OR2A4O95047 310 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 IGKV1-5P01602 117 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 MYCNOSP40205 109 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 FGL1Q08830 312 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 EBI3Q14213 229 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 SMCO1Q147U7 214 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 VMA21Q3ZAQ7 101 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 NMSQ5H8A3 153 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 SSX9Q7RTT3 188 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 OR2T10Q8NGZ9 312 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 OR1S1Q8NH92 325 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 OR10C1Q96KK4 312 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 RHOVQ96L33 236 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 OR2A7Q96R45 310 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 TSNAXQ99598 290 aaKnown RBP8.07□□□□□ -1.12
NEDD8-202ENST00000396828 HSPB9Q9BQS6 159 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 NEURL2Q9BR09 285 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 RANGRFQ9HD47 186 aaPredicted RBP8.07□□□□□ -1.12
NEDD8-202ENST00000396828 ZFP57Q9NU63 452 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 TMEM140Q9NV12 185 aa8.07□□□□□ -1.12
NEDD8-202ENST00000396828 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 NCBP2LA6PVI3 153 aaKnown RBP8.06□□□□□ -1.12
NEDD8-202ENST00000396828 MPTX1A8MV57 137 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 CCL24O00175 119 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 SNAPC5O75971 98 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 MOSP00540 346 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 PET100P0DJ07 73 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 F2RL1P55085 397 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 POU2AF1Q16633 256 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 OR4A47Q6IF82 309 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 TCTE3Q8IZS6 198 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 VKORC1L1Q8N0U8 176 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 Q8N9W7 124 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 ZBTB8BQ8NAP8 495 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-202ENST00000396828 OR2T35Q8NGX2 323 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 OR4A16Q8NH70 328 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 OR4A5Q8NH83 315 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 GPR146Q96CH1 333 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 ST6GAL2Q96JF0 529 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 WWC2-AS2Q96NR7 200 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 PRR25Q96S07 402 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-202ENST00000396828 COA4Q9NYJ1 87 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 CACNG5Q9UF02 275 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 CACFD1Q9UGQ2 172 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 LSM4Q9Y4Z0 139 aaKnown RBP8.06□□□□□ -1.12
NEDD8-202ENST00000396828 LYSTQ99698 3801 aa8.06□□□□□ -1.12
NEDD8-202ENST00000396828 SCGB1D2O95969 90 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 UBE2KP61086 200 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 CFHR3Q02985 330 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 FOXRED2Q8IWF2 684 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 TEX45Q8NA69 505 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 OR8H1Q8NGG4 311 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 DPF1Q92782 380 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 PPP1R14BQ96C90 147 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 FYTTD1Q96QD9 318 aaKnown RBP8.05□□□□□ -1.12
NEDD8-202ENST00000396828 BET1LQ9NYM9 111 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 KIAA1456Q9P272 454 aa8.05□□□□□ -1.12
NEDD8-202ENST00000396828 A0A0G2JRQ6 117 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 SRRM4A7MD48 611 aaKnown RBP8.04□□□□□ -1.12
NEDD8-202ENST00000396828 FAM90A26D6RGX4 464 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 WRBO00258 174 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 NBR2O15453 112 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 ST8SIA3O43173 380 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 KBTBD11O94819 623 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 SPDEFO95238 335 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 RLN2P04090 185 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 P0C879 139 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
NEDD8-202ENST00000396828 PSMB6P28072 239 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 NKX2-1P43699 371 aaPredicted RBP8.04□□□□□ -1.12
NEDD8-202ENST00000396828 S100A10P60903 97 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 SLC35B1P78383 322 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 PLGLAQ15195 96 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 MMDQ15546 238 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 ZFP69Q49AA0 526 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 LRRC37A5PQ49AS3 106 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 TEX38Q6PEX7 206 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 COMMD1Q8N668 190 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 OR4D5Q8NGN0 318 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 THAP6Q8TBB0 222 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 PPP1R1CQ8WVI7 109 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 RITA1Q96K30 269 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 ASCL2Q99929 193 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 MCRIP2Q9BUT9 160 aaKnown RBP8.04□□□□□ -1.12
NEDD8-202ENST00000396828 FKBP11Q9NYL4 201 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 PRNDQ9UKY0 176 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 DNAH1Q9P2D7 4330 aa8.04□□□□□ -1.12
NEDD8-202ENST00000396828 TENM2Q9NT68 2774 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 AP4M1O00189 453 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 UPK2O00526 184 aa8.03□□□□□ -1.12
NEDD8-202ENST00000396828 SLC25A17O43808 307 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms