RNA–Protein interactions for RNA: ENST00000395530.6

SPECC1-206, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 8,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-206ENST00000395530 FBLN5Q9UBX5 448 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 HSPB1P04792 205 aaKnown RBP10.84□□□□□ -0.67
SPECC1-206ENST00000395530 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 MSGN1A6NI15 193 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 CX3CL1P78423 397 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 C12orf57Q99622 126 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 GBF1Q92538 1859 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 NOTCH4Q99466 2003 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 SAA1P0DJI8 122 aaPredicted RBP10.84□□□□□ -0.67
SPECC1-206ENST00000395530 VDAC2P45880 294 aaPredicted RBP10.84□□□□□ -0.67
SPECC1-206ENST00000395530 GTF3AQ92664 365 aaKnown RBP10.84□□□□□ -0.67
SPECC1-206ENST00000395530 MAP1LC3CQ9BXW4 147 aa10.84□□□□□ -0.67
SPECC1-206ENST00000395530 HERVK_113P61574 105 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 A0A1W2PRX2 142 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 TRAV40A0A0B4J280 105 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 ZNF207O43670 478 aaKnown RBP10.83□□□□□ -0.68
SPECC1-206ENST00000395530 CCKARP32238 428 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 HIST1H1AQ02539 215 aaPredicted RBP10.83□□□□□ -0.68
SPECC1-206ENST00000395530 TMEM183BQ1AE95 376 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 MYOZ3Q8TDC0 251 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 SLC25A28Q96A46 364 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 GGACTQ9BVM4 153 aa10.83□□□□□ -0.68
SPECC1-206ENST00000395530 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 SRRM5B3KS81 715 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 TMEM177Q53S58 311 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 CLEC19AQ6UXS0 136 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 SPSB4Q96A44 273 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 PRSS22Q9GZN4 317 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 IL6RP08887 468 aaPredicted RBP10.82□□□□□ -0.68
SPECC1-206ENST00000395530 PRSS33Q8NF86 280 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 EIF3GO75821 320 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPECC1-206ENST00000395530 RNF224P0DH78 156 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 ROS1P08922 2347 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 AMY1AP04745 511 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 NPCDR1Q9BY65 106 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 ANOS1P23352 680 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 RPS20P60866 119 aaKnown RBP10.82□□□□□ -0.68
SPECC1-206ENST00000395530 NR2C2APQ86WQ0 139 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 PSMG3Q9BT73 122 aaPredicted RBP10.82□□□□□ -0.68
SPECC1-206ENST00000395530 IGKV3-20P01619 116 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 CD8AP01732 235 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 CD24P25063 80 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 CRYBB3P26998 211 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 TUBA4BQ9H853 241 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 FER1L5A0AVI2 2057 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.82□□□□□ -0.68
SPECC1-206ENST00000395530 GOLT1AQ6ZVE7 132 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 KIAA1671Q9BY89 1806 aa10.82□□□□□ -0.68
SPECC1-206ENST00000395530 NUP210Q8TEM1 1887 aaPredicted RBP10.81□□□□□ -0.68
SPECC1-206ENST00000395530 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 SCGB1C2P0DMR2 95 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 ZNF250P15622 560 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 PRR30Q53SZ7 412 aaPredicted RBP10.81□□□□□ -0.68
SPECC1-206ENST00000395530 SDHCQ99643 169 aaPredicted RBP10.81□□□□□ -0.68
SPECC1-206ENST00000395530 WNT10AQ9GZT5 417 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 TMEM191AQ9H0A3 160 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 FAM181BA6NEQ2 426 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 CLDND2Q8NHS1 167 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 RNASEH2CQ8TDP1 164 aaKnown RBP10.81□□□□□ -0.68
SPECC1-206ENST00000395530 HSPB8Q9UJY1 196 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 AP4M1O00189 453 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 IGHV3-11P01762 117 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 ZP1P60852 638 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 NUTF2P61970 127 aaKnown RBP10.81□□□□□ -0.68
SPECC1-206ENST00000395530 FAM89BQ8N5H3 189 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 GSX1Q9H4S2 264 aaPredicted RBP10.81□□□□□ -0.68
SPECC1-206ENST00000395530 IGKV1D-13A0A0B4J2D9 117 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 NMBP08949 121 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 DANCRP0C864 163 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 IGKV1-13P0DP09 117 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 RRHO14718 337 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 UBE2L6O14933 153 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 OR8A1Q8NGG7 326 aa10.81□□□□□ -0.68
SPECC1-206ENST00000395530 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 ZNF474Q6S9Z5 364 aaPredicted RBP10.8□□□□□ -0.68
SPECC1-206ENST00000395530 IGFBP2P18065 325 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 GCHFRP30047 84 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 FAM53AQ6NSI3 398 aaPredicted RBP10.8□□□□□ -0.68
SPECC1-206ENST00000395530 EFNB1P98172 346 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 SGK494Q96LW2 274 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 FOXI3A8MTJ6 420 aaPredicted RBP10.8□□□□□ -0.68
SPECC1-206ENST00000395530 UPK2O00526 184 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
SPECC1-206ENST00000395530 CRIM1Q9NZV1 1036 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
SPECC1-206ENST00000395530 ZNF841Q6ZN19 808 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 TNFRSF14Q92956 283 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 TRAF4Q9BUZ4 470 aaPredicted RBP10.8□□□□□ -0.68
SPECC1-206ENST00000395530 CD99P14209 185 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 CD69Q07108 199 aa10.8□□□□□ -0.68
SPECC1-206ENST00000395530 IGKV1-12A0A0C4DH73 117 aa10.79□□□□□ -0.68
SPECC1-206ENST00000395530 ERVH48-1M5A8F1 160 aa10.79□□□□□ -0.68
SPECC1-206ENST00000395530 TIMM23O14925 209 aa10.79□□□□□ -0.68
SPECC1-206ENST00000395530 IGKV1D-12P01611 117 aa10.79□□□□□ -0.68
SPECC1-206ENST00000395530 SRSF12Q8WXF0 261 aaKnown RBP10.79□□□□□ -0.68
SPECC1-206ENST00000395530 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
SPECC1-206ENST00000395530 C1QTNF9P0C862 333 aa10.79□□□□□ -0.68
SPECC1-206ENST00000395530 CKS2P33552 79 aa10.79□□□□□ -0.68
SPECC1-206ENST00000395530 Q5BKY6 102 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms