RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 TDGF1P3P51864 188 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 WDR82Q6UXN9 313 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 LINC00312Q9Y6C7 94 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 KBTBD11-OT1A0A1B0GTJ5 212 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 OR10W1Q8NGF6 305 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 OR5AN1Q8NGI8 311 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 PLAUP00749 431 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 PVRIGQ6DKI7 326 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 OR1P1Q8NH06 330 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 RNASE6Q93091 150 aaKnown RBP6.35□□□□□ -1.39
SYNE2-205ENST00000394768 SPAG8Q99932 426 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-205ENST00000394768 TRAV24A0A0B4J272 114 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 EFEMP2O95967 443 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 SRSF6Q13247 344 aaKnown RBP6.35□□□□□ -1.39
SYNE2-205ENST00000394768 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-205ENST00000394768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.35□□□□□ -1.39
SYNE2-205ENST00000394768 DNAJC30Q96LL9 226 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 PARD6GQ9BYG4 376 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-205ENST00000394768 TCF19Q9Y242 345 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 ALPK2Q86TB3 2170 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 A0A1W2PPE3 182 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 UPK3AO75631 287 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 IGHMP01871 453 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 KIAA0040Q15053 153 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 ARL6IP6Q8N6S5 226 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 ST20Q9HBF5 79 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 FBXL7Q9UJT9 491 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 CYSLTR1Q9Y271 337 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 UNC119Q13432 240 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 MS4A3Q96HJ5 214 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 CELA2BP08218 269 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-205ENST00000394768 PAX2Q02962 417 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 PCOLCEQ15113 449 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 CYP2G1PQ6ZSU1 146 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 NABP2Q9BQ15 211 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 HTN3P15516 51 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 TNFRSF14Q92956 283 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 ARID2Q68CP9 1835 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 SRIP30626 198 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 A0A0J9YW62 118 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 F2Z2F3 143 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 IGKV1D-33P01593 117 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 IGKV1-33P01594 117 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 C16orf47Q6ZP98 133 aaPredicted RBP6.34□□□□□ -1.39
SYNE2-205ENST00000394768 CFHR5Q9BXR6 569 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 ZGRF1Q86YA3 2104 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 SRSF1Q07955 248 aaKnown RBP eCLIP6.34□□□□□ -1.39
SYNE2-205ENST00000394768 NBR2O15453 112 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 FAM166AQ6J272 317 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 TMEM91Q6ZNR0 172 aa6.34□□□□□ -1.39
SYNE2-205ENST00000394768 IGHV3-72A0A0B4J1Y9 119 aa6.34□□□□□ -1.4
SYNE2-205ENST00000394768 MIC13Q5XKP0 118 aa6.34□□□□□ -1.4
SYNE2-205ENST00000394768 WNK3Q9BYP7 1800 aa6.34□□□□□ -1.4
SYNE2-205ENST00000394768 SDK2Q58EX2 2172 aa6.34□□□□□ -1.4
SYNE2-205ENST00000394768 TCF21O43680 179 aa6.34□□□□□ -1.4
SYNE2-205ENST00000394768 PGLYRP1O75594 196 aaPredicted RBP6.34□□□□□ -1.4
SYNE2-205ENST00000394768 XAF1Q6GPH4 301 aa6.34□□□□□ -1.4
SYNE2-205ENST00000394768 SIPA1L3O60292 1781 aaPredicted RBP6.34□□□□□ -1.4
SYNE2-205ENST00000394768 NCKAP5O14513 1909 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 SP9P0CG40 484 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 NCMAPQ5T1S8 102 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 PEX11BO96011 259 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 RNASE4P34096 147 aaKnown RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 IGSF11Q5DX21 431 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 FOXC2Q99958 501 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 HS3ST3B1Q9Y662 390 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 GLI3P10071 1580 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 CT83Q5H943 113 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 SAP25Q8TEE9 199 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 ZNF385AQ96PM9 386 aaKnown RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 PCNX2A6NKB5 2137 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 A0A1W2PP11 408 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 NBEAP1P0C6P0 100 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 RSPO4Q2I0M5 234 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 TEX45Q8NA69 505 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 FER1L6-AS1Q8NA97 138 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 MED19A0JLT2 244 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 ISOC2Q96AB3 205 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 RMI2Q96E14 147 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 AKIRIN1Q9H9L7 192 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 SEPSECSQ9HD40 501 aaKnown RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 BSPH1Q075Z2 132 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 SP7Q8TDD2 431 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 ADARB2-AS1A8MUL3 147 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 CD7P09564 240 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 IFITM2Q01629 132 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 RNF166Q96A37 237 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-205ENST00000394768 MARVELD3Q96A59 401 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 ST6GAL2Q96JF0 529 aa6.33□□□□□ -1.4
SYNE2-205ENST00000394768 IQCF6A8MYZ5 107 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 ATXN8Q156A1 80 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 TBR1Q16650 682 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 CENPWQ5EE01 88 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 SLC25A47Q6Q0C1 308 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 TRAV8-6A0A0B4J262 113 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 OVOL1O14753 267 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 GPR183P32249 361 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms