RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 NDUFS7O75251 213 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 SOD3P08294 240 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 SNRPCP09234 159 aaKnown RBP9.07□□□□□ -0.96
TCOF1-203ENST00000394269 GNB1P62873 340 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 CLEC12BQ2HXU8 276 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 KLF2Q9Y5W3 355 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-203ENST00000394269 PAGE4O60829 102 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 KBTBD11O94819 623 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 CD24P25063 80 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 RPL35P42766 123 aaKnown RBP9.07□□□□□ -0.96
TCOF1-203ENST00000394269 VDAC2P45880 294 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-203ENST00000394269 GNB2P62879 340 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 TREML4Q6UXN2 200 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 TMEM170AQ8WVE7 144 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 CELSR2Q9HCU4 2923 aa9.07□□□□□ -0.96
TCOF1-203ENST00000394269 IGHV3-21A0A0B4J1V1 117 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 PPIAL4CA0A0B4J2A2 164 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 CYB5BO43169 146 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 OR2C1O95371 312 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 PPIAL4GP0DN37 164 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 SSX8Q7RTT4 187 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 ACY3Q96HD9 319 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 SEBOXQ9HB31 216 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-203ENST00000394269 E7EUB6 86 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 IGHV1-8P0DP01 117 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 CDC34P49427 236 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-203ENST00000394269 ZNF343Q6P1L6 599 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-203ENST00000394269 OR10A7Q8NGE5 316 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 UNKLQ9H9P5 680 aaKnown RBP9.06□□□□□ -0.96
TCOF1-203ENST00000394269 DSCAML1Q8TD84 2053 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 TEX50A0A1B0GTY4 177 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 LOC102723971A0A1B0GUV8 181 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 PSMB3P49720 205 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 ACOT6Q3I5F7 207 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-203ENST00000394269 KHDC3LQ587J8 217 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 RAB1BQ9H0U4 201 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 UBTD1Q9HAC8 227 aa9.06□□□□□ -0.96
TCOF1-203ENST00000394269 TET2Q6N021 2002 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-203ENST00000394269 GCN1Q92616 2671 aaKnown RBP9.06□□□□□ -0.96
TCOF1-203ENST00000394269 H0YJW9 148 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 UPK2O00526 184 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 IFNA1P01562 189 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 HSPB1P04792 205 aaKnown RBP9.05□□□□□ -0.96
TCOF1-203ENST00000394269 GNLYP22749 145 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 ADIRFQ15847 76 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 DPPA3Q6W0C5 159 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 RBMS3Q6XE24 437 aaKnown RBP9.05□□□□□ -0.96
TCOF1-203ENST00000394269 OR9G1Q8NH87 305 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 PRNDQ9UKY0 176 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 HILPDAQ9Y5L2 63 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 B2MP61769 119 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-203ENST00000394269 HCP5Q6MZN7 132 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 SMIM7Q9BQ49 75 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 NCOR1P1Q9H4R4 102 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 TMEM14BQ9NUH8 114 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 INSIG2Q9Y5U4 225 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 COLCA2A8K830 154 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 IGFBP2P18065 325 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 RPL8P62917 257 aaKnown RBP9.05□□□□□ -0.96
TCOF1-203ENST00000394269 PNKDQ8N490 385 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 NECAP1Q8NC96 275 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 OR51G1Q8NGK1 321 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 MBD3L1Q8WWY6 194 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 MGST2Q99735 147 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 NPVFQ9HCQ7 196 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 WDR83OSQ9Y284 106 aa9.05□□□□□ -0.96
TCOF1-203ENST00000394269 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 MBP02144 154 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 CNTFRP26992 372 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 RPS10P46783 165 aaKnown RBP9.04□□□□□ -0.96
TCOF1-203ENST00000394269 PLGLAQ15195 96 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 EFNB3Q15768 340 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 TMEM155Q4W5P6 130 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 C19orf35Q6ZS72 473 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 OR4C13Q8NGP0 309 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 TVP23CQ96ET8 276 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 TMEM133Q9H2Q1 129 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 ITGB1BP1O14713 200 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 HNF1AP20823 631 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 TEPPQ6URK8 271 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 ABHD5Q8WTS1 349 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 FAM216AQ8WUB2 273 aa9.04□□□□□ -0.96
TCOF1-203ENST00000394269 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
TCOF1-203ENST00000394269 MEF2BQ02080 365 aaPredicted RBP9.03□□□□□ -0.96
TCOF1-203ENST00000394269 RAB31Q13636 194 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 ZNF833PQ6ZTB9 187 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 SLC35E3Q7Z769 313 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 OR52E5Q8NH55 327 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 OR2T6Q8NHC8 308 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 HIST1H2BAQ96A08 127 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 NABP2Q9BQ15 211 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 DOK5Q9P104 306 aa9.03□□□□□ -0.96
TCOF1-203ENST00000394269 PPOXP50336 477 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms