RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 GAGE1Q13065 139 aa13.59□□□□□ -0.23
PHTF1-205ENST00000393357 SLAQ13239 276 aa13.59□□□□□ -0.23
PHTF1-205ENST00000393357 PCNX2A6NKB5 2137 aa13.59□□□□□ -0.23
PHTF1-205ENST00000393357 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.58□□□□□ -0.23
PHTF1-205ENST00000393357 CXorf1O96002 111 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 CSN3P07498 182 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 LGALS4P56470 323 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 RBX1P62877 108 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 EFNB3Q15768 340 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 TIGITQ495A1 244 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 Q6ZS49 121 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 RTL8AQ9BWD3 113 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 BET1LQ9NYM9 111 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 WDR83OSQ9Y284 106 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 LOXL2Q9Y4K0 774 aa13.58□□□□□ -0.23
PHTF1-205ENST00000393357 CA2P00918 260 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 TSPOP30536 169 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 YPEL3P61236 119 aaPredicted RBP13.58□□□□□ -0.24
PHTF1-205ENST00000393357 MPV17L2Q567V2 206 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 ZNF738Q8NE65 137 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 ZNF331Q9NQX6 463 aaPredicted RBP13.58□□□□□ -0.24
PHTF1-205ENST00000393357 WNK2Q9Y3S1 2297 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 MED13LQ71F56 2210 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 TRAV5A0A0B4J249 113 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 hDV102S1A0JD36 115 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 RAB29O14966 203 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 APELAP0DMC3 54 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 ZNF138P52744 262 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 SLC25A40Q8TBP6 338 aa13.58□□□□□ -0.24
PHTF1-205ENST00000393357 ZNF324O75467 553 aaPredicted RBP13.57□□□□□ -0.24
PHTF1-205ENST00000393357 COLCA1Q6ZS62 124 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 OR2T6Q8NHC8 308 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 TMEM30CPA0ZSE6 113 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 BMPR1BO00238 502 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 APCSP02743 223 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 FOXF2Q12947 444 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 FAM201AQ5SY85 155 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 TSKUQ8WUA8 353 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 OR8B2Q96RD0 313 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
PHTF1-205ENST00000393357 SELENOVP59797 346 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
PHTF1-205ENST00000393357 CACNA1HO95180 2353 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 STAG3L2P0CL84 134 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 STAG3L3P0CL85 134 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 PSG1P11464 419 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 FBLN7Q53RD9 439 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 Q8N7P7 452 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 DEFB108BQ8NET1 73 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 KCNS1Q96KK3 526 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 ASCL2Q99929 193 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 CDC42EP3Q9UKI2 254 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 TMPRSS2O15393 492 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 IGLL1P15814 213 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 CA7P43166 264 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 ERVK-16P61578 105 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 RIPPLY2Q5TAB7 128 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 Q8N976 141 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 KCNE4Q8WWG9 221 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 DUSP13Q9UII6 198 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 NBASA2RRP1 2371 aa13.56□□□□□ -0.24
PHTF1-205ENST00000393357 ADGRG4Q8IZF6 3080 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 OR2T8A6NH00 312 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 OR5B21A6NL26 309 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 NUDT3O95989 172 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 CD46P15529 392 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 LINC00173Q6ZV60 143 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 TCTEX1D1Q8N7M0 179 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 SLC45A2Q9UMX9 530 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 V9GYV3 84 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 MPV17P39210 176 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 RIPPLY3P57055 190 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 OR4A47Q6IF82 309 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 NIT1Q86X76 327 aa13.55□□□□□ -0.24
PHTF1-205ENST00000393357 CORTO00230 105 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 UQCRFS1P47985 274 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 CNEP1R1Q8N9A8 125 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 FAM90A26D6RGX4 464 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 ZNRF1Q8ND25 227 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 COQ2Q96H96 371 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 MPC1Q9Y5U8 109 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 LOC105371242A0A075B767 164 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 UBE2V1Q13404 147 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 Q8NFD4 153 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
PHTF1-205ENST00000393357 NKX6-3A6NJ46 265 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 SELENOTP62341 195 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 RHOBP62745 196 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 SSX8Q7RTT4 187 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 POLDIP2Q9Y2S7 368 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 IGHV3-21A0A0B4J1V1 117 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 EPHA8P29322 1005 aaPredicted RBP13.53□□□□□ -0.24
PHTF1-205ENST00000393357 TMEM136Q6ZRR5 245 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 TMEM140Q9NV12 185 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 MGAQ8IWI9 3026 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 KMT2EQ8IZD2 1858 aa13.53□□□□□ -0.24
PHTF1-205ENST00000393357 PYYP10082 97 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 CD99P14209 185 aa13.52□□□□□ -0.24
PHTF1-205ENST00000393357 EBLN2Q6P2I7 272 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms