RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CITED1Q99966 193 aa10.39□□□□□ -0.75
USP44-202ENST00000393091 LYL1P12980 280 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 PSMB6P28072 239 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 AKR1C2P52895 323 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 TNFRSF9Q07011 255 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 ZBTB8BQ8NAP8 495 aaPredicted RBP10.38□□□□□ -0.75
USP44-202ENST00000393091 COMMD5Q9GZQ3 224 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 SLA2Q9H6Q3 261 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 ZFP57Q9NU63 452 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 CACNG5Q9UF02 275 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 MED6O75586 246 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 PLGLAQ15195 96 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 TNXAQ16473 311 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 AWAT1Q58HT5 328 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 SCAF4O95104 1147 aaKnown RBP10.38□□□□□ -0.75
USP44-202ENST00000393091 SLC35B1P78383 322 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 RBMXL1Q96E39 390 aaKnown RBP10.38□□□□□ -0.75
USP44-202ENST00000393091 DUX5Q96PT3 197 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 RNF114Q9Y508 228 aa10.38□□□□□ -0.75
USP44-202ENST00000393091 FAM223BA6NKX1 122 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 CYCSP99999 105 aaKnown RBP10.37□□□□□ -0.75
USP44-202ENST00000393091 FAM223AQ8IWN6 122 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 OR10C1Q96KK4 312 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 IGLV11-55A0A075B6I3 123 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 C2orf83Q53S99 150 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 OR1P1Q8NH06 330 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 CASTOR1Q8WTX7 329 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 PRR13Q9NZ81 148 aa10.37□□□□□ -0.75
USP44-202ENST00000393091 MSGN1A6NI15 193 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 WT1-ASQ06250 92 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 SSX9Q7RTT3 188 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 SMIM8Q96KF7 97 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 F11RQ9Y624 299 aaKnown RBP10.36□□□□□ -0.75
USP44-202ENST00000393091 TLN2Q9Y4G6 2542 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 FBXO24O75426 580 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 ADAP1O75689 374 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 CD83Q01151 205 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 TEX38Q6PEX7 206 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 CIB3Q96Q77 187 aaPredicted RBP10.36□□□□□ -0.75
USP44-202ENST00000393091 PSMB11A5LHX3 300 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 MDKP21741 143 aaPredicted RBP10.36□□□□□ -0.75
USP44-202ENST00000393091 RRAS2P62070 204 aaPredicted RBP10.36□□□□□ -0.75
USP44-202ENST00000393091 C2orf68Q2NKX9 166 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 USMG5Q96IX5 58 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 TNFRSF19Q9NS68 423 aa10.36□□□□□ -0.75
USP44-202ENST00000393091 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
USP44-202ENST00000393091 GSG1LQ6UXU4 331 aa10.35□□□□□ -0.75
USP44-202ENST00000393091 VN1R17PQ8TDU5 208 aa10.35□□□□□ -0.75
USP44-202ENST00000393091 FANCD2OSQ96PS1 177 aa10.35□□□□□ -0.75
USP44-202ENST00000393091 PARP11Q9NR21 331 aa10.35□□□□□ -0.75
USP44-202ENST00000393091 DMRT1Q9Y5R6 373 aa10.35□□□□□ -0.75
USP44-202ENST00000393091 U3KQ87 197 aa10.35□□□□□ -0.75
USP44-202ENST00000393091 FNDC10F2Z333 226 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 SOX15O60248 233 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 ACTL6BO94805 426 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 CNIH1O95406 144 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 HTR2BP41595 481 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 TCTEX1D4Q5JR98 221 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 NOXA1Q86UR1 476 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 KLHDC1Q8N7A1 406 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 UBE2E2Q96LR5 201 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 RAB40CQ96S21 281 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 RBKSQ9H477 322 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 MPTX1A8MV57 137 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 CORTO00230 105 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 TSC22D2O75157 780 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 RNASE2P10153 161 aaKnown RBP10.34□□□□□ -0.75
USP44-202ENST00000393091 NDUFA11Q86Y39 141 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 RNASEH2CQ8TDP1 164 aaKnown RBP10.34□□□□□ -0.75
USP44-202ENST00000393091 PLEKHA3Q9HB20 300 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 WSB1Q9Y6I7 421 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 ADARB2-AS1A8MUL3 147 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 HOXB5P09067 269 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 GIPP09681 153 aaPredicted RBP10.34□□□□□ -0.75
USP44-202ENST00000393091 CDX1P47902 265 aaPredicted RBP10.34□□□□□ -0.75
USP44-202ENST00000393091 H2BFSP57053 126 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 C10orf55Q5SWW7 151 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 ZNF491Q8N8L2 437 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 CLCC1Q96S66 551 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 TXN2Q99757 166 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 MGAT4CQ9UBM8 478 aa10.34□□□□□ -0.75
USP44-202ENST00000393091 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.76
USP44-202ENST00000393091 HMX3A6NHT5 357 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 SH2D7A6NKC9 451 aaPredicted RBP10.33□□□□□ -0.76
USP44-202ENST00000393091 PRSS46E5RG02 174 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 CYB5BO43169 146 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 IAH1Q2TAA2 248 aaPredicted RBP10.33□□□□□ -0.76
USP44-202ENST00000393091 UNQ5815/PRO19632Q6UWF5 114 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 NECAP1Q8NC96 275 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 LFNGQ8NES3 379 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 OR1S1Q8NH92 325 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 PDCD10Q9BUL8 212 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 RCL1Q9Y2P8 373 aaKnown RBP10.33□□□□□ -0.76
USP44-202ENST00000393091 SONP18583 2426 aaKnown RBP10.33□□□□□ -0.76
USP44-202ENST00000393091 SYNGR2O43760 224 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 MYOD1P15172 320 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 PAX9P55771 341 aa10.33□□□□□ -0.76
USP44-202ENST00000393091 ERHP84090 104 aaKnown RBP10.33□□□□□ -0.76
USP44-202ENST00000393091 EXOSC2Q13868 293 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms