RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 S100A16Q96FQ6 103 aaKnown RBP12.43□□□□□ -0.42
PTPRK-208ENST00000392449 QTRT1Q9BXR0 403 aaKnown RBP12.43□□□□□ -0.42
PTPRK-208ENST00000392449 FXYD6Q9H0Q3 95 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 PLEKHA2Q9HB19 425 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 ANAPC10Q9UM13 185 aa12.43□□□□□ -0.42
PTPRK-208ENST00000392449 PGLYRP1O75594 196 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-208ENST00000392449 MFAP2P55001 183 aa12.42□□□□□ -0.42
PTPRK-208ENST00000392449 FCAMRQ8WWV6 532 aa12.42□□□□□ -0.42
PTPRK-208ENST00000392449 MOB3AQ96BX8 217 aa12.42□□□□□ -0.42
PTPRK-208ENST00000392449 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
PTPRK-208ENST00000392449 AIFM2Q9BRQ8 373 aa12.42□□□□□ -0.42
PTPRK-208ENST00000392449 HINT2Q9BX68 163 aa12.42□□□□□ -0.42
PTPRK-208ENST00000392449 TEX50A0A1B0GTY4 177 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 EIF4EP06730 217 aaKnown RBP12.41□□□□□ -0.42
PTPRK-208ENST00000392449 OR13C7P0DN81 318 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 G6PCP35575 357 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 ZNF585BQ52M93 769 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 DHRS11Q6UWP2 260 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 OR52B4Q8NGK2 314 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 COMMD9Q9P000 198 aa12.41□□□□□ -0.42
PTPRK-208ENST00000392449 IGHV3OR16-8A0A075B7F1 116 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 OR2T8A6NH00 312 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 KRASP01116 189 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 HLA-DMAP28067 261 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 LPAR6P43657 344 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 PLET1Q6UQ28 207 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 SLC16A13Q7RTY0 426 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 LYSMD2Q8IV50 215 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 GDPD1Q8N9F7 314 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 OR5H2Q8NGV7 314 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 CD300LFQ8TDQ1 290 aa12.4□□□□□ -0.42
PTPRK-208ENST00000392449 DBX1A6NMT0 343 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 SERPINE2P07093 398 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 TRAPPC2P0DI81 140 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 TRAPPC2BP0DI82 140 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 NAT1P18440 290 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 F2RP25116 425 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.432e-7■■■■□ 22.7
PTPRK-208ENST00000392449 HRH1P35367 487 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 ERVK-16P61578 105 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 SLC25A24Q6NUK1 477 aa12.4□□□□□ -0.43
PTPRK-208ENST00000392449 DGCR14Q96DF8 476 aaKnown RBP12.4□□□□□ -0.43
PTPRK-208ENST00000392449 TGOLN2O43493 480 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 NCS1P62166 190 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 CROCCP3Q8IVE0 287 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 TSPAN14Q8NG11 270 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 SRSF8Q9BRL6 282 aaKnown RBP12.39□□□□□ -0.43
PTPRK-208ENST00000392449 CHRDL1Q9BU40 450 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 OR51B2Q9Y5P1 312 aa12.39□□□□□ -0.43
PTPRK-208ENST00000392449 F8W735 103 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-208ENST00000392449 ZNF207O43670 478 aaKnown RBP12.38□□□□□ -0.43
PTPRK-208ENST00000392449 TMEM127O75204 238 aa12.38□□□□□ -0.43
PTPRK-208ENST00000392449 C8orf88P0DMB2 117 aa12.38□□□□□ -0.43
PTPRK-208ENST00000392449 PRSS3P35030 304 aa12.38□□□□□ -0.43
PTPRK-208ENST00000392449 TAS2R46P59540 309 aa12.38□□□□□ -0.43
PTPRK-208ENST00000392449 ZNF436Q9C0F3 470 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-208ENST00000392449 THYN1Q9P016 225 aa12.38□□□□□ -0.43
PTPRK-208ENST00000392449 COMMD3Q9UBI1 195 aa12.38□□□□□ -0.43
PTPRK-208ENST00000392449 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
PTPRK-208ENST00000392449 GPR31O00270 319 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
PTPRK-208ENST00000392449 SNX29P2Q8IUI4 249 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 UBAC2Q8NBM4 344 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 OR6F1Q8NGZ6 308 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 VN1R17PQ8TDU5 208 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 TMEM190Q8WZ59 177 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 UFC1Q9Y3C8 167 aa12.37□□□□□ -0.43
PTPRK-208ENST00000392449 F11RQ9Y624 299 aaKnown RBP12.37□□□□□ -0.43
PTPRK-208ENST00000392449 A0A087WXM4 84 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 FGF2P09038 288 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 VBP1P61758 197 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 CMTM1Q8IZ96 169 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 OR1L6Q8NGR2 347 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 GPX8Q8TED1 209 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 SCARB1Q8WTV0 552 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 BORCS5Q969J3 196 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 LSM10Q969L4 123 aaKnown RBP12.36□□□□□ -0.43
PTPRK-208ENST00000392449 ZNF414Q96IQ9 312 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 GGTLC1Q9BX51 225 aa12.36□□□□□ -0.43
PTPRK-208ENST00000392449 MRPL27Q9P0M9 148 aaKnown RBP12.36□□□□□ -0.43
PTPRK-208ENST00000392449 K7EIM0 57 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 SNAPC5O75971 98 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 ADMP35318 185 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 RNASE12Q5GAN4 147 aaKnown RBP12.35□□□□□ -0.43
PTPRK-208ENST00000392449 MARC2Q969Z3 335 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 OVOL2Q9BRP0 275 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 C20orf24Q9BUV8 137 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 ALMS1Q8TCU4 4167 aa12.35□□□□□ -0.43
PTPRK-208ENST00000392449 PLECQ15149 4684 aaKnown RBP12.35□□□□□ -0.43
PTPRK-208ENST00000392449 LOC102724200A0A096LPH7 203 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-208ENST00000392449 IGKV1-39P01597 117 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 IGKV1D-39P04432 117 aa12.34□□□□□ -0.43
PTPRK-208ENST00000392449 THOC7Q6I9Y2 204 aaKnown RBP12.34□□□□□ -0.43
PTPRK-208ENST00000392449 HSD17B13Q7Z5P4 300 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms