RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MAFAQ8NHW3 353 aaPredicted RBP11.98□□□□□ -0.49
RTF1-201ENST00000389629 GCSHP23434 173 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 MRPL14Q6P1L8 145 aaKnown RBP11.98□□□□□ -0.49
RTF1-201ENST00000389629 C17orf82Q86X59 251 aaPredicted RBP11.98□□□□□ -0.49
RTF1-201ENST00000389629 LYPD6Q86Y78 171 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 C5orf17Q8NAS9 161 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 ADTRPQ96IZ2 230 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 PEF1Q9UBV8 284 aaKnown RBP11.98□□□□□ -0.49
RTF1-201ENST00000389629 FER1L5A0AVI2 2057 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 RIGQ13278 110 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 RPL39P5Q59GN2 51 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 Q5PR19 223 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 PET117Q6UWS5 81 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 DCTN5Q9BTE1 182 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 TRIOBPQ9H2D6 2365 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 hADV38S2A0JD32 116 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 EAF1Q96JC9 268 aaPredicted RBP11.98□□□□□ -0.49
RTF1-201ENST00000389629 ARRDC1-AS1Q9H2J1 176 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 FABP2P12104 132 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 FOXL1Q12952 345 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 OR4F17Q8NGA8 305 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 LILRA1O75019 489 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 HSPE1P61604 102 aaKnown RBP11.97□□□□□ -0.49
RTF1-201ENST00000389629 MOB3BQ86TA1 216 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 CLEC5AQ9NY25 188 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 CIDEAO60543 219 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 ANOS1P23352 680 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 SMIM12Q96EX1 92 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 HSPB7Q9UBY9 170 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 PPIAL4DF5H284 164 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 RPL8P62917 257 aaKnown RBP11.97□□□□□ -0.49
RTF1-201ENST00000389629 C1orf174Q8IYL3 243 aa11.97□□□□□ -0.49
RTF1-201ENST00000389629 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 FOXG1P55316 489 aaPredicted RBP11.96□□□□□ -0.49
RTF1-201ENST00000389629 ARF6P62330 175 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 ZNF726P1Q15940 193 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 TM4SF20Q53R12 229 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 HS3ST6Q96QI5 342 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 TFF1P04155 84 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 AAMDCQ9H7C9 122 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 CACNA1GO43497 2377 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 WNK2Q9Y3S1 2297 aa11.96□□□□□ -0.49
RTF1-201ENST00000389629 A0A1B0GWJ7 208 aa11.96□□□□□ -0.5
RTF1-201ENST00000389629 AMMECR1LQ6DCA0 310 aa11.96□□□□□ -0.5
RTF1-201ENST00000389629 AGMATQ9BSE5 352 aa11.96□□□□□ -0.5
RTF1-201ENST00000389629 HEATR1Q9H583 2144 aaKnown RBP11.96□□□□□ -0.5
RTF1-201ENST00000389629 APC2O95996 2303 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 A0A1W2PN81 502 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 TMPRSS2O15393 492 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 C3orf79P0CE67 100 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 SCGB1C2P0DMR2 95 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 TNXAQ16473 311 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 PERPQ96FX8 193 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 NDFIP1Q9BT67 221 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 CRIM1Q9NZV1 1036 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 CENPFP49454 3210 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 RELQ04864 619 aaPredicted RBP11.95□□□□□ -0.5
RTF1-201ENST00000389629 SLC35E4Q6ICL7 350 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 PPP1R32Q7Z5V6 425 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 CHD3Q12873 2000 aaKnown RBP11.95□□□□□ -0.5
RTF1-201ENST00000389629 FAM157AC9JC47 383 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 MPV17P39210 176 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 PAX9P55771 341 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 OR1L8Q8NGR8 309 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 FNDC4Q9H6D8 234 aaPredicted RBP11.95□□□□□ -0.5
RTF1-201ENST00000389629 HILPDAQ9Y5L2 63 aa11.95□□□□□ -0.5
RTF1-201ENST00000389629 UBE2V1Q13404 147 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 RSPO1Q2MKA7 263 aaPredicted RBP11.94□□□□□ -0.5
RTF1-201ENST00000389629 CDC42EP3Q9UKI2 254 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.5
RTF1-201ENST00000389629 KLF14Q8TD94 323 aaPredicted RBP11.94□□□□□ -0.5
RTF1-201ENST00000389629 GUCD1Q96NT3 240 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 CLEC3BP05452 202 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 HCP5Q6MZN7 132 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 INO80CQ6PI98 192 aaPredicted RBP11.94□□□□□ -0.5
RTF1-201ENST00000389629 NAA38Q9BRA0 125 aaKnown RBP11.94□□□□□ -0.5
RTF1-201ENST00000389629 MEGF9Q9H1U4 602 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 ZNF407Q9C0G0 2248 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 SPTBN1Q01082 2364 aaKnown RBP11.94□□□□□ -0.5
RTF1-201ENST00000389629 TRAV9-1A0A075B6T8 112 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 Q6ZWC4 215 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 FAM222BQ8WU58 562 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 LOXL4Q96JB6 756 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 WDR83OSQ9Y284 106 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 SPTBN2O15020 2390 aa11.94□□□□□ -0.5
RTF1-201ENST00000389629 NCOR1O75376 2440 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 SPATA31B1PQ5VZV4 182 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 HIGD1CA8MV81 97 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 HBBP68871 147 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 TBR1Q16650 682 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 C20orf144Q9BQM9 153 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 GNB1LQ9BYB4 327 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 KIAA1549LQ6ZVL6 1849 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 GPX1P07203 203 aa11.93□□□□□ -0.5
RTF1-201ENST00000389629 MPV17L2Q567V2 206 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms