RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 BUB1B-PAK6H3BSN5 160 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 M0R036 132 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 KBTBD11O94819 623 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 HRASP01112 189 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 IGLV2-23P01705 113 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 GPR6P46095 362 aaPredicted RBP8.18□□□□□ -1.1
LTN1-203ENST00000389195 SPATA31B1PQ5VZV4 182 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 SLC24A4Q8NFF2 622 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 OR10A7Q8NGE5 316 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 RAB1CQ92928 201 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 NEIL1Q96FI4 390 aaPredicted RBP8.18□□□□□ -1.1
LTN1-203ENST00000389195 MGST2Q99735 147 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 NOTCH2Q04721 2471 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 SH2D7A6NKC9 451 aaPredicted RBP8.18□□□□□ -1.1
LTN1-203ENST00000389195 A6NNC1 897 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 ZNF727A8MUV8 499 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 RBFOX2O43251 390 aaKnown RBP eCLIP8.18□□□□□ -1.1
LTN1-203ENST00000389195 IGLV1-47P01700 117 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 APOA2P02652 100 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 AREGP15514 252 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 IGFBP2P18065 325 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 ATF4P18848 351 aaPredicted RBP8.18□□□□□ -1.1
LTN1-203ENST00000389195 ZNF787Q6DD87 383 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 HIST2H2BCQ6DN03 193 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 OR10G4Q8NGN3 311 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 OR10G9Q8NGN4 311 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 OR10G7Q8NGN6 311 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 NCOR1P1Q9H4R4 102 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 SETD2Q9BYW2 2564 aaPredicted RBP8.18□□□□□ -1.1
LTN1-203ENST00000389195 ACANP16112 2415 aa8.18□□□□□ -1.1
LTN1-203ENST00000389195 LOC105371242A0A075B767 164 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 IGHV1-3A0A0C4DH29 117 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 TIMM23O14925 209 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 FOXH1O75593 365 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 NPY1RP25929 384 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 SSX8Q7RTT4 187 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 TIMD4Q96H15 378 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 ACY3Q96HD9 319 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 TMEM147Q9BVK8 224 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 CLEC7AQ9BXN2 247 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 COMMD5Q9GZQ3 224 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 PLEKHA3Q9HB20 300 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 MAP1LC3B2A6NCE7 125 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 IGHV4-39P01824 125 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 AGAP20933 346 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 RPL8P62917 257 aaKnown RBP8.17□□□□□ -1.1
LTN1-203ENST00000389195 HES1Q14469 280 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 ICAM4Q14773 271 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 MRGPRG-AS1Q2M3A8 158 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 KLF17Q5JT82 389 aaPredicted RBP8.17□□□□□ -1.1
LTN1-203ENST00000389195 OR4C13Q8NGP0 309 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 RAB24Q969Q5 203 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 RPEQ96AT9 228 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 MAP1LC3BQ9GZQ8 125 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 CHODLQ9H9P2 273 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 SEPSECSQ9HD40 501 aaKnown RBP8.17□□□□□ -1.1
LTN1-203ENST00000389195 ENY2Q9NPA8 101 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 RPS10P5Q9NQ39 176 aa8.17□□□□□ -1.1
LTN1-203ENST00000389195 PRSS46E5RG02 174 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 NDUFA2O43678 99 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 RAB11AP62491 216 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
LTN1-203ENST00000389195 TNXAQ16473 311 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 KIR3DL3Q8N743 410 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 TCTEX1D1Q8N7M0 179 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.16□□□□□ -1.1
LTN1-203ENST00000389195 CLDND2Q8NHS1 167 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 FAM216AQ8WUB2 273 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 PERPQ96FX8 193 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 SLC39A9Q9NUM3 307 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 DOK5Q9P104 306 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 FOXA2Q9Y261 457 aaPredicted RBP8.16□□□□□ -1.1
LTN1-203ENST00000389195 ITGB1BP1O14713 200 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 YIF1AO95070 293 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 LIPFP07098 398 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 ZNF674Q2M3X9 581 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 ASPHD1Q5U4P2 390 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 UQCC3Q6UW78 93 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 VMO1Q7Z5L0 202 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 DTX2Q86UW9 622 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 ZNF429Q86V71 674 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 OR5T1Q8NG75 326 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 OR51G1Q8NGK1 321 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 TMEM186Q96B77 213 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 CIB3Q96Q77 187 aaPredicted RBP8.16□□□□□ -1.1
LTN1-203ENST00000389195 RAB9BQ9NP90 201 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 GAB2Q9UQC2 676 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 WASHC3Q9Y3C0 194 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 A0A1W2PPI3 338 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 TRIM77I1YAP6 450 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 IL6RP08887 468 aaPredicted RBP8.16□□□□□ -1.1
LTN1-203ENST00000389195 TLE4Q04727 773 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 SVBPQ8N300 66 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 ZNF709Q8N972 641 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 ABHD5Q8WTS1 349 aa8.16□□□□□ -1.1
LTN1-203ENST00000389195 MIOXQ9UGB7 285 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms