RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 F2RL2O00254 374 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 TMPRSS2O15393 492 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 YPEL1O60688 119 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 HRASP01112 189 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 CHRNB4P30926 498 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 RPL23P62829 140 aaKnown RBP11.75□□□□□ -0.53
CLCN4-201ENST00000380829 ZNF788Q6ZQV5 615 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 TCF23Q7RTU1 214 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 OR5T1Q8NG75 326 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 YPEL2Q96QA6 119 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 HSD17B10Q99714 261 aaKnown RBP11.75□□□□□ -0.53
CLCN4-201ENST00000380829 NGBQ9NPG2 151 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 NAT8Q9UHE5 227 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 E7EQL1 145 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 CCL21O00585 134 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 C1QTNF9P0C862 333 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 CGB3P0DN86 165 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 CGB7P0DN87 165 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 MSMO1Q15800 293 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 SSX8Q7RTT4 187 aa11.75□□□□□ -0.53
CLCN4-201ENST00000380829 P0C879 139 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 DUTP33316 252 aaKnown RBP11.74□□□□□ -0.53
CLCN4-201ENST00000380829 CDKN1AP38936 164 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 ACOT6Q3I5F7 207 aaPredicted RBP11.74□□□□□ -0.53
CLCN4-201ENST00000380829 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 CCL17Q92583 94 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 TRAV1-1A0A0B4J248 108 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 KBTBD11-OT1A0A1B0GTJ5 212 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 LRRC30A6NM36 301 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 M0R1X1 148 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 HMGB3O15347 200 aaKnown RBP11.74□□□□□ -0.53
CLCN4-201ENST00000380829 CYP2G1PQ6ZSU1 146 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 CLN8Q9UBY8 286 aa11.74□□□□□ -0.53
CLCN4-201ENST00000380829 DSCAML1Q8TD84 2053 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.73□□□□□ -0.53
CLCN4-201ENST00000380829 FCGR3BO75015 233 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 PLAUP00749 431 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 TMEM11P17152 192 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 TMEM241Q24JQ0 296 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 SPANXN5Q5MJ07 72 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 DPPA3Q6W0C5 159 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
CLCN4-201ENST00000380829 Q6ZVH6 145 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 OR2T10Q8NGZ9 312 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 RNASE6Q93091 150 aaKnown RBP11.73□□□□□ -0.53
CLCN4-201ENST00000380829 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
CLCN4-201ENST00000380829 GRIFINA4D1Z8 144 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 RBMXL2O75526 392 aaKnown RBP11.72□□□□□ -0.53
CLCN4-201ENST00000380829 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 CDSNQ15517 529 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 Q6ZWC4 215 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 H2BFWTQ7Z2G1 175 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 ST6GALNAC3Q8NDV1 305 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 TANC2Q9HCD6 1990 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 MAP1LC3B2A6NCE7 125 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 VSTM5A8MXK1 200 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 CCL25O15444 150 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 MMP23AO75900 390 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 COL5A1-AS1Q5SY13 56 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 TPTE2P1Q5T6R2 138 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 VN1R17PQ8TDU5 208 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 C20orf144Q9BQM9 153 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 MAP1LC3BQ9GZQ8 125 aa11.72□□□□□ -0.53
CLCN4-201ENST00000380829 KBTBD11O94819 623 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 NDUFB8O95169 186 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 MMDQ15546 238 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 SPINK9Q5DT21 86 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 CT45A1Q5HYN5 189 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 MRPL52Q86TS9 123 aaKnown RBP11.71□□□□□ -0.53
CLCN4-201ENST00000380829 TCTEX1D1Q8N7M0 179 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 OR1L6Q8NGR2 347 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 CT45A3Q8NHU0 189 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 P2RX4Q99571 388 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 HIPK2Q9H2X6 1198 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.71□□□□□ -0.53
CLCN4-201ENST00000380829 AURKAIP1Q9NWT8 199 aaPredicted RBP11.71□□□□□ -0.53
CLCN4-201ENST00000380829 HSPB7Q9UBY9 170 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 ITPR1Q14643 2758 aa11.71□□□□□ -0.53
CLCN4-201ENST00000380829 TRAV38-1A0A0B4J264 116 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 NKX6-3A6NJ46 265 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 FAM90A26D6RGX4 464 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 TMEM178BH3BS89 294 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 CD3EP07766 207 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 IL3RAP26951 378 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 CHRNA7P36544 502 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 PRAMEF5Q5TYX0 476 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 GATAD1Q8WUU5 269 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 PARLQ9H300 379 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 MANBALQ9NQG1 85 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 TMEM106BQ9NUM4 274 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.54
CLCN4-201ENST00000380829 CACNA1AO00555 2505 aa11.71□□□□□ -0.54
CLCN4-201ENST00000380829 PPIAL4EA0A075B759 164 aa11.7□□□□□ -0.54
CLCN4-201ENST00000380829 SAA2-SAA4A0A096LPE2 208 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms