RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NTF3P20783 257 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 KITLGP21583 273 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 GNB1P62873 340 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 RPL39P5Q59GN2 51 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 SLC24A4Q8NFF2 622 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 SFRP2Q96HF1 295 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 SPRR3Q9UBC9 169 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 IL19Q9UHD0 177 aa10.37□□□□□ -0.75
PRPF40B-202ENST00000380281 TRAV3A0A0B4J244 114 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 HSBP1L1C9JCN9 74 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 MLNRO43193 412 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 SP1P08047 785 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 RELBQ01201 579 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 KLF14Q8TD94 323 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 PINX1Q96BK5 328 aaKnown RBP10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 CLUHP3Q96NS8 147 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 PCSK5Q92824 1860 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 TANC2Q9HCD6 1990 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 TRAV30A0A087WSZ9 112 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 TRGV5A0A0B4J1U4 118 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 DPRXA6NFQ7 191 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 C3orf79P0CE67 100 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 PRAMEF5Q5TYX0 476 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 MIC13Q5XKP0 118 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 C1orf210Q8IVY1 113 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 OR2D3Q8NGH3 330 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 TMEM45BQ96B21 275 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 IGKV3D-15A0A087WSY6 115 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 MDFIC2A0A1B0GVS7 189 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 OR2T8A6NH00 312 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 LRRC30A6NM36 301 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 M0R1X1 148 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 SMPD2O60906 423 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 MMP23AO75900 390 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 VENTXO95231 258 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 COX5AP20674 150 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 YPEL3P61236 119 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 FOXL1Q12952 345 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 ZNRF1Q8ND25 227 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 MEGF9Q9H1U4 602 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 POLDIP2Q9Y2S7 368 aa10.36□□□□□ -0.75
PRPF40B-202ENST00000380281 TRBV20OR9-2A0A075B6H5 130 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 ZNF253O75346 499 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 SAP30O75446 220 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 CDC34P49427 236 aaPredicted RBP10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 VWA1Q6PCB0 445 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 NPCDR1Q9BY65 106 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 APC2O95996 2303 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 NAV3Q8IVL0 2385 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 TMEM30CPA0ZSE6 113 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 PRB4P10163 310 aaPredicted RBP10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 HOXC12P31275 282 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 BRWD1-AS2P59051 145 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 MORN2Q502X0 79 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 PRR27Q6MZM9 219 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 OR2Z1Q8NG97 314 aa10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 LSM10Q969L4 123 aaKnown RBP10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 ZNF430Q9H8G1 570 aaPredicted RBP10.35□□□□□ -0.75
PRPF40B-202ENST00000380281 OR9G9P0C7N8 305 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 IGHV1-2P23083 117 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 CATR1Q13166 79 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 MRPL49Q13405 166 aaKnown RBP10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 HLA-DRB5Q30154 266 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 PDLIM3Q53GG5 364 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 NANOS1Q8WY41 292 aaKnown RBP10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 COQ2Q96H96 371 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 LINC00470Q9BZP3 86 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 CTXND1A0A1B0GTU2 59 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 ZNF891A8MT65 544 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 KLRC4-KLRK1H3BQV0 150 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 RRHO14718 337 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 Q6ZS49 121 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 TMEM147Q9BVK8 224 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 ANKRD11Q6UB99 2663 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 ESDP10768 282 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 GATA2P23769 480 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 ZNRD1Q9P1U0 126 aa10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 COLQQ9Y215 455 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-202ENST00000380281 ZGRF1Q86YA3 2104 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 IGLC7A0M8Q6 106 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 CD46P15529 392 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 GPR12P47775 334 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 ZNF83P51522 516 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 LHFPL4Q7Z7J7 247 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 KLHDC1Q8N7A1 406 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 LRRC29Q8WV35 223 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 A0A1W2PS18 150 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 CD99P14209 185 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 ZNF766Q5HY98 468 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 SPATA31B1PQ5VZV4 182 aa10.33□□□□□ -0.76
PRPF40B-202ENST00000380281 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms