RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 FAM120AOSQ5T036 256 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OR52E5Q8NH55 327 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OR2T6Q8NHC8 308 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 MAFAQ8NHW3 353 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-201ENST00000379989 DDB2Q92466 427 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF524Q96C55 264 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OXGR1Q96P68 337 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 RAB1BQ9H0U4 201 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OR2D2Q9H210 308 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 TECRQ9NZ01 308 aaKnown RBP6.24□□□□□ -1.41
CDKL5-201ENST00000379989 V9GYV3 84 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 SPINK8P0C7L1 97 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 FABP2P12104 132 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 CX3CL1P78423 397 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 PCOLCEQ15113 449 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF562Q6V9R5 426 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 SHISA6Q6ZSJ9 500 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 BPIFA4PQ86YQ2 179 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 OR10D3Q8NH80 312 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 KCNIP2Q9NS61 270 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF257Q9Y2Q1 563 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 TIMM9Q9Y5J7 89 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 NCKAP5O14513 1909 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 KBTBD11-OT1A0A1B0GTJ5 212 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 IAPPP10997 89 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF823P16415 610 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 INSL3P51460 131 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 TMPRSS3P57727 454 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 WFDC2Q14508 124 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 RNPS1Q15287 305 aaKnown RBP6.23□□□□□ -1.41
CDKL5-201ENST00000379989 LINC00173Q6ZV60 143 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 DEFB123Q8N688 67 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.23□□□□□ -1.41
CDKL5-201ENST00000379989 RAX2Q96IS3 184 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 RAB40CQ96S21 281 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 KCNK17Q96T54 332 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 SH2D2AQ9NP31 389 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF391Q9UJN7 358 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 SYS1-DBNDD2H3BUS1 97 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 COX8AP10176 69 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 SSR4P51571 173 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 FOXL2NBQ6ZUU3 175 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 SH2D6Q7Z4S9 175 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 TMEM251Q8N6I4 163 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 PIGTQ969N2 578 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 C5orf30Q96GV9 206 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 ANAPC13Q9BS18 74 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 TNFRSF19Q9NS68 423 aa6.23□□□□□ -1.41
CDKL5-201ENST00000379989 SH2D7A6NKC9 451 aaPredicted RBP6.22□□□□□ -1.41
CDKL5-201ENST00000379989 NEURL1O76050 574 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 IGHG1P01857 330 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 HLA-DQA1P01909 254 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 MT-ATP8P03928 68 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 PSG2P11465 335 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 HERV-K104P61576 105 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 HBG1P69891 147 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 HBG2P69892 147 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 KISS1Q15726 138 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 RNASEKQ6P5S7 137 aaKnown RBP6.22□□□□□ -1.41
CDKL5-201ENST00000379989 MS4A6AQ9H2W1 248 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 KLRF1Q9NZS2 232 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 SCO2A0A1W2PP80 73 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 CFIP05156 583 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 GPR12P47775 334 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 IZUMO4Q1ZYL8 232 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 RDH5Q92781 318 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 SRSF8Q9BRL6 282 aaKnown RBP6.22□□□□□ -1.41
CDKL5-201ENST00000379989 C1QTNF4Q9BXJ3 329 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 PSENENQ9NZ42 101 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 A0A1W2PPV4 95 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 PPYP01298 95 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 APCSP02743 223 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 AMY1AP04745 511 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 FCGR2BP31994 310 aaPredicted RBP6.22□□□□□ -1.41
CDKL5-201ENST00000379989 GRB2P62993 217 aaKnown RBP6.22□□□□□ -1.41
CDKL5-201ENST00000379989 PDCD1Q15116 288 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 CR1LQ2VPA4 569 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 ZDHHC23Q8IYP9 409 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 GATSQ8NAP1 163 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 C20orf78Q9BR46 151 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 LINC00312Q9Y6C7 94 aa6.22□□□□□ -1.41
CDKL5-201ENST00000379989 CACNA1EQ15878 2313 aa6.21□□□□□ -1.41
CDKL5-201ENST00000379989 M0QXV9 152 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 NKX2-8O15522 239 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 COX6A1P12074 109 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 RPS18P62269 152 aaKnown RBP6.21□□□□□ -1.42
CDKL5-201ENST00000379989 NNATQ16517 81 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 ETDBQ3ZM63 59 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 PLA2G2CQ5R387 149 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 C10orf128Q5T292 105 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 SAMD5Q5TGI4 173 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 ABHD17BQ5VST6 288 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 DHRS13Q6UX07 377 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 Q6ZSR3 168 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 SPACA3Q8IXA5 215 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 TTC9CQ8N5M4 171 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 URB1-AS1Q96HZ7 61 aa6.21□□□□□ -1.42
CDKL5-201ENST00000379989 VGLL1Q99990 258 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms